RetrogeneDB ID: | retro_meug_1020 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold261548:1382..1856(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMEUG00000006157 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 70.19 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | AAVNRLANLYLQASYSYLSLGFYFDRDDVALPRVSRFFRELAKDKREGAERLMRLQNQRGGRVLLQAVQK |
A.VN.LANLYLQ...SY..L.FYF..D.VALPRVS.FF.EL.KDK.EG.E..M.LQNQ..G..LLQAVQK | |
Retrocopy | ATVNCLANLYLQVPFSYRFLDFYFNQDNVALPRVSHFFHELLKDKCEGVELFM*LQNQCEGHILLQAVQK |
Parental | PAQDEWGRSLDAMEAANLEKGLSQALLKLHALGSSQGDPHLCDFLESHYLGEEVKLLKRLGDHLSTLRHL |
.AQDEWG.SL.A....NLEKGL.Q.LLKLHALG.SQGDP.LCDFL.SHYL..E.KLLK.LG..L.TL.H. | |
Retrocopy | SAQDEWGLSLAAI---NLEKGLKQVLLKLHALGWSQGDPDLCDFLQSHYLYKELKLLKPLGNDLTTLCHS |
Parental | QADPQAGLGEYLFERLNLKHD |
QADPQ.GLG.YLFERL.LKH. | |
Retrocopy | QADPQVGLGQYLFERLSLKHN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Macropus eugenii | ENSMEUG00000006157 | 5 retrocopies | |
Macropus eugenii | ENSMEUG00000011453 | 2 retrocopies | |
Monodelphis domestica | ENSMODG00000013730 | 3 retrocopies | |
Sarcophilus harrisii | ENSSHAG00000003637 | 1 retrocopy |