RetrogeneDB ID: | retro_meug_349 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold103845:3389..3862(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMEUG00000006157 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 51.88 % |
Parental protein coverage: | 98.14 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | AAVNRLANLYLQASYSYLSLGFYFDRDDVALPRVSRFFRELAKDKREGAERLMRLQNQRGG-RVLLQAVQ |
AA.NR..NL.L.ASY.YLS...YFDRDDVAL......F.......RE.AE.LM.LQNQRGG....LQ... | |
Retrocopy | AAMNRQINLELYASYAYLSTSYYFDRDDVALKNFAKYFLLQSHEEREHAEKLMKLQNQRGG<PIFLQDIR |
Parental | KPAQDEWGRSLDAMEAA-NLEKGLSQALLKLHALGSSQGDPHLCDFLESHYLGEEVKLLKRLGDHLSTLR |
KP..D.W...L.AME.A..LEK...Q.LL.LH.L.....DPH.CDF.E.HYL.E.VK..K.LGDH...LR | |
Retrocopy | KPDRDDWESGLNAMECALHLEKNVNQSLLELHKLATDKNDPHSCDFIETHYLDEQVKSIKQLGDHVTHLR |
Parental | HLQADPQAGLGEYLFERLNL |
...A.P..G..E.LF....L | |
Retrocopy | KMGA-PDSGMAEHLFDKHTL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Macropus eugenii | ENSMEUG00000006157 | 5 retrocopies | |
Macropus eugenii | ENSMEUG00000011453 | 2 retrocopies | |
Monodelphis domestica | ENSMODG00000013730 | 3 retrocopies | |
Sarcophilus harrisii | ENSSHAG00000003637 | 1 retrocopy |