RetrogeneDB ID: | retro_meug_1836 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold6421:34857..35136(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PACRGL | ||
Ensembl ID: | ENSMEUG00000009937 | ||
Aliases: | None | ||
Description: | PARK2 co-regulated-like [Source:HGNC Symbol;Acc:28442] |
Percent Identity: | 97.85 % |
Parental protein coverage: | 69.4 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | FSDQPRASSAFAAIYSKGGIPCRLVHGSVKHKLQWDCLPETLPFDPLLITLAEGLRETKHPYTFVSKEGF |
FSDQPRASSAFAAIYSKGGIPC.LVHGSVKHKLQWDCLPETLPFDPLLITLAEGLRETKHPYTFVSKEGF | |
Retrocopy | FSDQPRASSAFAAIYSKGGIPCKLVHGSVKHKLQWDCLPETLPFDPLLITLAEGLRETKHPYTFVSKEGF |
Parental | KELLLVEGATQKTVPLLPRLIPV |
KELLLVEG.TQKTVPLLPRLIPV | |
Retrocopy | KELLLVEGDTQKTVPLLPRLIPV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Dipodomys ordii | ENSDORG00000015625 | 1 retrocopy | |
Homo sapiens | ENSG00000163138 | 1 retrocopy | |
Gorilla gorilla | ENSGGOG00000012603 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000009937 | 2 retrocopies |
retro_meug_1836 , retro_meug_1954,
|
Monodelphis domestica | ENSMODG00000000641 | 2 retrocopies | |
Oryctolagus cuniculus | ENSOCUG00000002186 | 1 retrocopy | |
Pan troglodytes | ENSPTRG00000015945 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000004140 | 1 retrocopy | |
Tarsius syrichta | ENSTSYG00000001584 | 1 retrocopy |