RetrogeneDB ID: | retro_meug_491 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold123559:7276..7675(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | WDYHV1 | ||
Ensembl ID: | ENSMEUG00000008130 | ||
Aliases: | None | ||
Description: | WDYHV motif containing 1 [Source:HGNC Symbol;Acc:25490] |
Percent Identity: | 71.74 % |
Parental protein coverage: | 66.18 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | MEGEGSVSR-GYQPASPPRDACTYSSCYCEENIWKLCEYIKNHD-QYPLEECYAVFISNERRMIPIWKQQ |
ME.EG..S..GYQP.SP...ACT.SSC.CEENI.K.CEYIK.HD..YPL.ECY.VFISNERRM.P.WK.Q | |
Retrocopy | MEEEGFTSE<GYQPVSPSWNACT*SSCPCEENIGKICEYIKSHDDRYPLQECYGVFISNERRMTPVWKHQ |
Parental | ARPGDGPIIWDYHVVLLHVSSGGQSFIYDLDTVL-PFPCPFDTYVEDAFKSDDDIHPQFRRKFRVIRA |
A..GDGP..WDYHV.L.HVSSGGQSFIYDLD.VL.P.P..FDTYVE..FKSDDDI..QF.RKF.VI.A | |
Retrocopy | AKTGDGPLVWDYHVILFHVSSGGQSFIYDLDVVL>PCP--FDTYVEIIFKSDDDICLQF-RKF*VIGA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Callithrix jacchus | ENSCJAG00000000865 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000008130 | 3 retrocopies |
retro_meug_1679, retro_meug_491 , retro_meug_565,
|
Oryctolagus cuniculus | ENSOCUG00000014201 | 1 retrocopy |