RetrogeneDB ID: | retro_mluc_1145 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429799:3197953..3198347(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | GLIPR2 | ||
Ensembl ID: | ENSMLUG00000011791 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 70.9 % |
Parental protein coverage: | 87.42 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | QHGVPPLKLCKKLNREAQQYSE-ALASTRILKHSPESSRGQCGENLAWASYDQPGQEVADRWYSEIKNYN |
QHG.P..KLCK.L..EA.QYSE.ALAS.R..K..PESS..Q..ENLAWASY.Q.G.EVAD.WYS.IKN.. | |
Retrocopy | QHGLPLRKLCKGLI*EA*QYSE<ALASMRTPKPTPESSPSQRRENLAWASYGQTGKEVADTWYSVIKNCS |
Parental | FQQPGFTSGTGHFT-AMVWKNTKKMGVGKASASDGSSFVVARYFPAGNVVNQGFFEENVLPPKK |
FQQPGF.S.TGHF...MVW.NTK.MGV..ASA.DGSSFV.AR.FP.GNV.NQG.FEENVLPPKK | |
Retrocopy | FQQPGFNSKTGHFS<SMVWENTKRMGVERASARDGSSFVLARHFPSGNVLNQGIFEENVLPPKK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Canis familiaris | ENSCAFG00000030686 | 1 retrocopy | |
Dasypus novemcinctus | ENSDNOG00000008950 | 1 retrocopy | |
Dipodomys ordii | ENSDORG00000012831 | 1 retrocopy | |
Felis catus | ENSFCAG00000012762 | 2 retrocopies | |
Microcebus murinus | ENSMICG00000017673 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000011791 | 2 retrocopies |
retro_mluc_1145 , retro_mluc_475,
|
Mus musculus | ENSMUSG00000028480 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000014838 | 1 retrocopy | |
Tupaia belangeri | ENSTBEG00000009276 | 2 retrocopies |