RetrogeneDB ID: | retro_mluc_475 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | AAPE02069132:2135..2586(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | GLIPR2 | ||
Ensembl ID: | ENSMLUG00000011791 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 69.93 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | AASKQFNNEVLRAHNE-YRQQHGVPPLKLCKKLNREAQQYSEALASTRILKHSPESSRGQCGENLAWASY |
.ASKQFNNEVLRAH......QHG.P..KLCK.L..EA.QYSEALAS.R..KH..ESS..Q..ENLAWASY | |
Retrocopy | SASKQFNNEVLRAHRP<HPRQHGLPLRKLCKGLI*EA*QYSEALASMRTPKHTLESSPSQRRENLAWASY |
Parental | DQPGQEVADRWYSEIKNYNFQQPGFTSGTGHF-TAMVWKNTKKMGVGKASASDGSSFVVARYFPAGNVVN |
...G.EVAD.WYS.IKN..FQQPGF.S.TGHF..AMVW.NTK.MGV..ASA.DG..FV.AR.FPAGNV.N | |
Retrocopy | GRTGKEVADTWYSVIKNCSFQQPGFNSETGHF<QAMVWENTKRMGVERASARDGPFFVLARHFPAGNVLN |
Parental | QGFFEENVLPPKK |
QG.FEENVLPPKK | |
Retrocopy | QGIFEENVLPPKK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Canis familiaris | ENSCAFG00000030686 | 1 retrocopy | |
Dasypus novemcinctus | ENSDNOG00000008950 | 1 retrocopy | |
Dipodomys ordii | ENSDORG00000012831 | 1 retrocopy | |
Felis catus | ENSFCAG00000012762 | 2 retrocopies | |
Microcebus murinus | ENSMICG00000017673 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000011791 | 2 retrocopies |
retro_mluc_1145, retro_mluc_475 ,
|
Mus musculus | ENSMUSG00000028480 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000014838 | 1 retrocopy | |
Tupaia belangeri | ENSTBEG00000009276 | 2 retrocopies |