>retro_mluc_1795
ATGGCCGGAGTGGCTTTCGTACAGTGGCCCTCGGGTGCCCAGGAGCTGCACCCGAAGGCGCTCTCGGCCGGCTCGCAGTT
CGTGGGCCTCATGGCCGTGCTCACGGCCTGCTTTGCCAGTGCCTTCGCTGGGGTGTGCTTTGAGAAAATCATAAAAGAAA
CCAAGCAGTCGGTGTGGATCAGAAACATTCAACTGGGTTTCTTCGGGAGCGTATTTGGCTCGATGGGCGTGTACGTGTAT
GAAGGAGAACTGGTATCACAGAACGGGTTTTTTCCAGGGCTGCAACCGACTCACCTGGGCAGTTGTTGCGCTTCAGGCAC
TGGGGGGCCTTGTCATAGCGACTGTTAGAAAGCATGCAGATAATATTTTAAAAGGATTTGCAACCTCTTTATCCATAATA
TTATCGACACTGATATCCTACTTTTGGCTACAAGATTCTGTGCCAACCAGTGTCTTCTTCCTCGGAGCCGTCCTTGTAAT
AGCAGCTACTTTCATA
ORF - retro_mluc_1795 Open Reading Frame is not conserved.
Retrocopy - Parental Gene Alignment summary:
Percent Identity: |
89.16 % |
Parental protein coverage: |
50.61 % |
Number of stop codons detected: |
0 |
Number of frameshifts detected |
1 |
Retrocopy - Parental Gene Alignment:
Parental | MAGVAFVQWPSDTQELDSKALSAGSQFVGLMAVLTACFSSGFAGVYFEKILKETKQSVWIRNIQLGFFGS |
| MAGVAFVQWPS..QEL..KALSAGSQFVGLMAVLTACF.S.FAGV.FEKI.KETKQSVWIRNIQLGFFGS |
Retrocopy | MAGVAFVQWPSGAQELHPKALSAGSQFVGLMAVLTACFASAFAGVCFEKIIKETKQSVWIRNIQLGFFGS |
|
Parental | VFGLMGVYVYDGELVSQN-GFFQGYNRLTWAVVALQALGGLVIAAVIKYADNILKGFATSLSIILSTLIS |
| VFG.MGVYVY.GELVSQN.GFFQG.NRLTWAVVALQALGGLVIA.V.K.ADNILKGFATSLSIILSTLIS |
Retrocopy | VFGSMGVYVYEGELVSQN>GFFQGCNRLTWAVVALQALGGLVIATVRKHADNILKGFATSLSIILSTLIS |
|
Parental | YFWLQDFVPTSVFFLGAILVIAATFL |
| YFWLQD.VPTSVFFLGA.LVIAATF. |
Retrocopy | YFWLQDSVPTSVFFLGAVLVIAATFI |
|
Legend:
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Myotis lucifugus was not studied using RNA-Seq expression data.
Myotis lucifugus was not studied using ChIP-Seq data.
Myotis lucifugus was not studied using EST data.
Myotis lucifugus was not studied using FANTOM5 data.
retro_mluc_1795 was not experimentally validated.
Retrocopy orthology:
Myotis lucifugus does not belong to any of the species groups (eutheria, teleost or neognath), studied for retrocopy-based homology. For more information about studied groups, please go to
help section.
Parental genes homology:
Parental genes homology involve
2 parental genes, and
3 retrocopies.