RetrogeneDB ID: | retro_mluc_1861 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429931:1278855..1279525(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | REXO2 | ||
Ensembl ID: | ENSMLUG00000009030 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 91.96 % |
Parental protein coverage: | 94.09 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | MLGGSLRSGLLRGVGGSRGQFGARGVREGGAAMAAGESMAQRMVWVDLEMTGLDIEKDQIIEMACLITDS |
MLGGSLRS.LLRGVGGSRGQFGARGVREGGAAMA.GESM.Q.MVWVDLEM.GLDIEKDQIIEMACLIT.S | |
Retrocopy | MLGGSLRSRLLRGVGGSRGQFGARGVREGGAAMAVGESMVQQMVWVDLEMMGLDIEKDQIIEMACLITNS |
Parental | DLNILAEGPNLIIKQPDELL-DSMSDWCKEHHGKSGLTKAVKESTVTLQQAEYEFLSFVRQQTPPGLCPL |
DLNILAEGPNLIIKQPDELL.DSM.DWCK..HGKS.LTKAVKESTVTLQQA.YEFLSFV.QQTPP.LCPL | |
Retrocopy | DLNILAEGPNLIIKQPDELL>DSM*DWCKKYHGKSSLTKAVKESTVTLQQAQYEFLSFV*QQTPPRLCPL |
Parental | AGNSVHADKKFLDKYMPQFMKHLHYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIRELQF |
AGNSVHADKKFLDKYMPQFMKHLHYR.IDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIRELQF | |
Retrocopy | AGNSVHADKKFLDKYMPQFMKHLHYRTIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIRELQF |
Parental | YRNNIFKKKTDEKK |
YRNNIFKKK.DE.. | |
Retrocopy | YRNNIFKKKADEEE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Choloepus hoffmanni | ENSCHOG00000013497 | 1 retrocopy | |
Callithrix jacchus | ENSCJAG00000012434 | 1 retrocopy | |
Dipodomys ordii | ENSDORG00000011255 | 1 retrocopy | |
Equus caballus | ENSECAG00000005988 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000009030 | 1 retrocopy |
retro_mluc_1861 ,
|
Monodelphis domestica | ENSMODG00000013913 | 1 retrocopy | |
Tarsius syrichta | ENSTSYG00000002237 | 1 retrocopy |