RetrogeneDB ID: | retro_mluc_1982 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429975:1445728..1446333(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | EIF3M | ||
Ensembl ID: | ENSMLUG00000014727 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 81.86 % |
Parental protein coverage: | 54.28 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | MSVPAFIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIE-ACDVCLKEDDKDVESVMNSVVS |
MSVPAFI.ISEED.AAELRA.LKSKGAE.SEENSEGGLH.DLAQIIE..CD..LKEDDKDVESVMNS... | |
Retrocopy | MSVPAFI-ISEEDRAAELRASLKSKGAEVSEENSEGGLHADLAQIIE<TCDARLKEDDKDVESVMNSLAA |
Parental | LLLILEPEKQEALIENLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTPVRYTVYCSLIKVAASCGAIQY |
LL..LEPEKQ.AL.ENLCEKLVKFREG.RPSLRLQLLSNL.HGMD.NTPV.YTV.CSLI.VAASCGAIQ. | |
Retrocopy | LLWVLEPEKQGALMENLCEKLVKFREGKRPSLRLQLLSNLVHGMDENTPVSYTV*CSLIEVAASCGAIQH |
Parental | IPTELDQVRKWISDWNLTTEKKHTLLRLLYEALVDCKKSDAASKVMVELLGSYTEDNASQARVD |
IP.EL.QVRK.ISDWNLTTEK.HTL.RLL.EA.V.C.KSDAA.KVMV.LLGSYTE..ASQARV. | |
Retrocopy | IPAELGQVRKRISDWNLTTEKAHTL*RLLSEARVGCEKSDAAPKVMVDLLGSYTEASASQARVE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000005338 | 2 retrocopies | |
Echinops telfairi | ENSETEG00000013437 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000014727 | 2 retrocopies |
retro_mluc_1982 , retro_mluc_431,
|
Mus musculus | ENSMUSG00000027170 | 1 retrocopy | |
Oryctolagus cuniculus | ENSOCUG00000004483 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000015913 | 1 retrocopy | |
Pteropus vampyrus | ENSPVAG00000015083 | 1 retrocopy | |
Vicugna pacos | ENSVPAG00000007791 | 1 retrocopy |