Parental gene: | EIF3M, ENSBTAG00000005338 |
| Aliases: | EIF3M, HFL-B5 |
| Description: | eukaryotic translation initiation factor 3 subunit M [Source:RefSeq peptide;Acc:NP_001030389] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 15:64095494..64112928(+) |
>ENSBTAG00000005338
ATGAGTGTCCCGGCGTTCATCGACATCAGCGAGGAAGATCAGGCTGCTGAACTTCGCGCTTATTTGAAGTCTAAAGGAGC
TGAAATTTCAGAAGAGAATTCAGAAGGTGGACTTCATGTAGATTTAGCTCAGATTATTGAAGCCTGCGATGTATGTCTGA
AGGAAGATGATAAAGATGTTGAAAGTGTGATGAACAGCGTGGTATCCCTCCTGTTGATCCTGGAACCAGATAAGCAAGAA
GCTCTGATTGAAAGCCTATGTGAGAAACTGGTCAAATTTCGGGAAGGTGAACGTCCGTCTCTGAGACTGCAGTTGCTAAG
CAACCTTTTCCATGGGATGGATAAGAATACTCCTGTAAGATATACAGTGTATTGCAGCCTCATTAAAGTGGCAGCATCTT
GTGGGGCCATCCAGTATATTCCAACTGAGCTGGATCAAGTTAGAAAATGGATTTCTGACTGGAACCTCACCACTGAAAAA
AAACACACCCTTTTAAGACTACTTTATGAGGCACTTGTGGATTGTAAGAAAAGTGATGCCGCATCAAAAGTTATGGTGGA
ATTGTTAGGCAGTTACACGGAGGACAATGCTTCCCAGGCTCGAGTTGATGCCCACAGGTGTATTGTGCGAGCATTGAAAG
ATCCAAATGCATTCCTTTTTGACCATCTTCTTACGTTAAAACCAGTCAAGTTTTTGGAAGGCGAGCTTATTCATGATCTT
TTAACCATTTTTGTGAGTGCTAAATTGGCATCATATGTCAAGTTTTATCAGAATAATAAAGACTTCATTGATTCACTTGG
CCTACTGCATGAACAGAATATGGCAAAAATGAGACTGCTTACTTTTATGGGAATGGCCGTGGAAAATAAAGAAATTTCTT
TTGACACAATGCAACAAGAACTTCATATTGGAGCTGATGATGTTGAAGCATTTGTTATTGATGCTGTAAGAACTAAAATG
GTCTACTGCAAAATTGATCAAACCCAGAGAAAAGTTGTTGTCAGTCATAGCACACATCGGACATTTGGAAAACAGCAGTG
GCAGCAACTCTATGACACACTTAATGCCTGGAAACAAAATTTGAACAAAGTGAAAAACAGCCTTTTGAGTCTTTCTGACA
CCTGA
ATGAGTGTCCCGGCGTTCATCGACATCAGCGAGGAAGATCAGGCTGCTGAACTTCGCGCTTATTTGAAGTCTAAAGGAGC
TGAAATTTCAGAAGAGAATTCAGAAGGTGGACTTCATGTAGATTTAGCTCAGATTATTGAAGCCTGCGATGTATGTCTGA
AGGAAGATGATAAAGATGTTGAAAGTGTGATGAACAGCGTGGTATCCCTCCTGTTGATCCTGGAACCAGATAAGCAAGAA
GCTCTGATTGAAAGCCTATGTGAGAAACTGGTCAAATTTCGGGAAGGTGAACGTCCGTCTCTGAGACTGCAGTTGCTAAG
CAACCTTTTCCATGGGATGGATAAGAATACTCCTGTAAGATATACAGTGTATTGCAGCCTCATTAAAGTGGCAGCATCTT
GTGGGGCCATCCAGTATATTCCAACTGAGCTGGATCAAGTTAGAAAATGGATTTCTGACTGGAACCTCACCACTGAAAAA
AAACACACCCTTTTAAGACTACTTTATGAGGCACTTGTGGATTGTAAGAAAAGTGATGCCGCATCAAAAGTTATGGTGGA
ATTGTTAGGCAGTTACACGGAGGACAATGCTTCCCAGGCTCGAGTTGATGCCCACAGGTGTATTGTGCGAGCATTGAAAG
ATCCAAATGCATTCCTTTTTGACCATCTTCTTACGTTAAAACCAGTCAAGTTTTTGGAAGGCGAGCTTATTCATGATCTT
TTAACCATTTTTGTGAGTGCTAAATTGGCATCATATGTCAAGTTTTATCAGAATAATAAAGACTTCATTGATTCACTTGG
CCTACTGCATGAACAGAATATGGCAAAAATGAGACTGCTTACTTTTATGGGAATGGCCGTGGAAAATAAAGAAATTTCTT
TTGACACAATGCAACAAGAACTTCATATTGGAGCTGATGATGTTGAAGCATTTGTTATTGATGCTGTAAGAACTAAAATG
GTCTACTGCAAAATTGATCAAACCCAGAGAAAAGTTGTTGTCAGTCATAGCACACATCGGACATTTGGAAAACAGCAGTG
GCAGCAACTCTATGACACACTTAATGCCTGGAAACAAAATTTGAACAAAGTGAAAAACAGCCTTTTGAGTCTTTCTGACA
CCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 9 .36 RPM |
| SRP017611_kidney | 36 .27 RPM |
| SRP017611_liver | 15 .25 RPM |
| ERP005899_muscle | 184 .71 RPM |
| ERP005899_liver | 40 .45 RPM |
| SRP030211_testis | 111 .39 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Echinops telfairi | ENSETEG00000013437 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000014727 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000027170 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000004483 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000015913 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000015083 | ortholog_one2one | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000007791 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_812 | 80.08 | 61.23 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_btau_1736 | 98.93 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000005338 retrocopies