RetrogeneDB ID: | retro_mluc_2461 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL430459:42318..43412(+) | ||
Located in intron of: | ENSMLUG00000007276 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | OXA1L | ||
Ensembl ID: | ENSMLUG00000012893 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 93.99 % |
Parental protein coverage: | 78.83 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | FAEAQVQAP-PVIPATPSPTAVTEVASGETADVVQAAAEQSFAELGLGSYTPVGLIQNLLEYMHVDLGLP |
FAEAQVQAP..VIPA.PSPTAVTEVASGETADVVQAAAEQSF.ELGLGSYTPVGLIQNLLEYMHVDLGLP | |
Retrocopy | FAEAQVQAP<SVIPAMPSPTAVTEVASGETADVVQAAAEQSFTELGLGSYTPVGLIQNLLEYMHVDLGLP |
Parental | WWGAIALCTVLARCLVFPLIVKGQREAAKIHNHMPEIQKFSTRIREAKLAGDHAEFYRASSEMTLYQKKH |
WW.AIALCTVLARCLVFPLIVKGQREAAKIH.HMPEIQKFSTRIREAKLAGDHAEFYR.S.EMTLYQKKH | |
Retrocopy | WWRAIALCTVLARCLVFPLIVKGQREAAKIHSHMPEIQKFSTRIREAKLAGDHAEFYRSSLEMTLYQKKH |
Parental | DIKLFKPLILPLTQAPIFISFFISLREMANLPVPSLQTGGLWWFQDLTLSDPTYILPLVVTATMWGVLEL |
DIKLFKPLILPLTQAPIFISFFISLREMANLPVPSLQTGGLWWFQDLTLSDPTYILPLVVTATM.GVLEL | |
Retrocopy | DIKLFKPLILPLTQAPIFISFFISLREMANLPVPSLQTGGLWWFQDLTLSDPTYILPLVVTATM*GVLEL |
Parental | GAETGVQSSDLHWMRNVMRLIPLAVLPITVHFPSAVFVYWFSSNMFSLVQVSCLRIPGVRTMLKIPQRVV |
.AETGVQSSDLHWMRNVMRLI.LAVLPITVHFP.AVFVYWFSSNMFSLVQVSCLRIPGV.TMLKIPQ..V | |
Retrocopy | CAETGVQSSDLHWMRNVMRLITLAVLPITVHFPLAVFVYWFSSNMFSLVQVSCLRIPGVHTMLKIPQCAV |
Parental | HDPDKLPPREGFIKSFKSGWKNAELNYQLQERERRMQNHLELAARGPLRQTFTHNPLLQHGKNPPPNTPN |
HD.DKLPPREGFIKSFKSGWKNAE.NYQLQ.RE..MQNHLELAAR.PLRQTFTHNPLLQHGKNPPPNTPN | |
Retrocopy | HDSDKLPPREGFIKSFKSGWKNAEINYQLQKREWCMQNHLELAARAPLRQTFTHNPLLQHGKNPPPNTPN |
Parental | SSSNKPKSKQPWRDTL |
SSSNKPKSK.PWRDTL | |
Retrocopy | SSSNKPKSKKPWRDTL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Myotis lucifugus | ENSMLUG00000012893 | 1 retrocopy |
retro_mluc_2461 ,
|
Monodelphis domestica | ENSMODG00000005347 | 1 retrocopy | |
Oryctolagus cuniculus | ENSOCUG00000000720 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000000631 | 1 retrocopy | |
Ictidomys tridecemlineatus | ENSSTOG00000003318 | 1 retrocopy |