RetrogeneDB ID: | retro_mluc_347 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429931:765804..766920(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMLUG00000024388 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | LIASA | ||
Ensembl ID: | ENSMLUG00000004602 | ||
Aliases: | None | ||
Description: | Lipoyl synthase, mitochondrial A [Source:UniProtKB/TrEMBL;Acc:G1P2T3] |
Percent Identity: | 90.59 % |
Parental protein coverage: | 99.73 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MSLRCGVVVRIVRPQVFGKYLCSPVRAVSSLPDKKKE-FLKNGPDLQDFVSGDLADKSNWDEYKGNLKRQ |
MSLRCGVVVR..RPQVFGKYLCSPVRAVSSLPDKKK..FL..GPDL.DFVS.DLADKS.WDEYK.NLKRQ | |
Retrocopy | MSLRCGVVVRAMRPQVFGKYLCSPVRAVSSLPDKKKGGFLQTGPDLRDFVSRDLADKSTWDEYKRNLKRQ |
Parental | KGERLRLPPWLKTEIPMGKNYNKLKNTLRNLNLHTVCEEARCPNIGECWGGGEYATATATIMLMGDTCTR |
KGERLRLPPWLKT.IPMG.NY.KLKNTLRNLNLHTVCEEARCPNIGECWGGG.YATATA.IMLMGDTCTR | |
Retrocopy | KGERLRLPPWLKTRIPMGRNYSKLKNTLRNLNLHTVCEEARCPNIGECWGGGKYATATARIMLMGDTCTR |
Parental | GCRFCSVKTARKPPPLDANEPYNTAKAIAEWGLDYVVLTSVDRDDLPDGGAEHFAKTVSYLKERNPKILV |
GCRFCSVKTAR.PPP.D.NEP.NT.KAIAEW.LDYVVLTSV.RDD..DGGAEHFAKTVSYLKERNPKILV | |
Retrocopy | GCRFCSVKTARNPPPVDVNEPCNTTKAIAEWRLDYVVLTSVGRDDVTDGGAEHFAKTVSYLKERNPKILV |
Parental | ECLTPDFRGDLKAIEKVALSGLDVYAHNVETVPELQRKVRDPRANFDQSLRVLKHAKEVQPDVISKTSIM |
ECLTPDFRGDLKAIEKVALSGLDV.AH.VETVPELQRKVRDPRANFDQSL.VLKHAKE.QPDVISKTSIM | |
Retrocopy | ECLTPDFRGDLKAIEKVALSGLDVFAHHVETVPELQRKVRDPRANFDQSLPVLKHAKEIQPDVISKTSIM |
Parental | LGLGEDDEQVYATMKALREADVDCLTLGQYMQPTKRHLKVEEYITPEKFKYWEKVGNDLGFHYTASGPLV |
LGL.EDDEQVYATMK.LREADVDCLTLGQYMQPTK..LKVEEYITP.KFKYWE.VGN.LGFHYTASGPLV | |
Retrocopy | LGLDEDDEQVYATMKLLREADVDCLTLGQYMQPTKSSLKVEEYITPKKFKYWERVGNELGFHYTASGPLV |
Parental | RSSYKAGEFFLKNLVAKRKTKA |
RSSYKAGEFFLKNLVAKRKTKA | |
Retrocopy | RSSYKAGEFFLKNLVAKRKTKA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Choloepus hoffmanni | ENSCHOG00000012946 | 2 retrocopies | |
Dasypus novemcinctus | ENSDNOG00000007417 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000004602 | 2 retrocopies |
retro_mluc_1985, retro_mluc_347 ,
|
Mus musculus | ENSMUSG00000029199 | 1 retrocopy | |
Tursiops truncatus | ENSTTRG00000014293 | 1 retrocopy |