RetrogeneDB ID: | retro_mluc_389 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429817:1114780..1116124(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMLUG00000006618 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMLUG00000009782 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 93.96 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MTVPSLEELDSFKYNDLQNLAKSLGLRANLRADKLLKALKAHLKREARKENGNQDESQTSASSCDETELQ |
MTVPSLEELDSFKY.DLQNLAKSLGLRANLRADKLLKALKAHLK.EARKENGNQDESQTSASSC.ETELQ | |
Retrocopy | MTVPSLEELDSFKYSDLQNLAKSLGLRANLRADKLLKALKAHLKWEARKENGNQDESQTSASSCNETELQ |
Parental | ISSQKQAEWEPAGHVTKKRRRRRTVHSNPDSQQDHSEIKSSDPIEFQNQEKQENQALTPVAEVPSPPDER |
ISSQK.AEWEPAGHVTKKRRR.RTV.SNPDSQQD.SEIK.SDP.EFQNQEKQENQAL.PVAEVPSPPDER | |
Retrocopy | ISSQKHAEWEPAGHVTKKRRRHRTVQSNPDSQQDRSEIKTSDPTEFQNQEKQENQALRPVAEVPSPPDER |
Parental | QGNENAMSSG----NSNEDSKVPSERKKSVYTDGFSKSGKNKRIATTTPNFKKLHEAHFKEMESIDQYIK |
QGNENA.S.G....N.NEDSK.PSERKKSVYTDGFSKSGKNKRIA..TPNFKKLHEAHFKEMESIDQYIK | |
Retrocopy | QGNENAVSLGNSGINGNEDSKLPSERKKSVYTDGFSKSGKNKRIANSTPNFKKLHEAHFKEMESIDQYIK |
Parental | RKKKNFEQHNSLNELKKRSITKEVVATPVGLQRRFSMACTPSSQQRSPGPAQGAADLSTLYMKGSVKRST |
RKKKNFEQHNSLNELKKRSITKEVVATPVGLQRRFSMACTPSSQQRS.G.AQGAADLSTLYMKGSVK.ST | |
Retrocopy | RKKKNFEQHNSLNELKKRSITKEVVATPVGLQRRFSMACTPSSQQRSQGRAQGAADLSTLYMKGSVKHST |
Parental | LSATKMNVRFSAATKDNEYKRSLTKTPARKSPHVSISGNTPKGQAVLGTNKLKATKRDSATVITPFKFSA |
LSATKMNVRFSAATK.NEYKRSLTKTPARKSPHVSISGNTPKGQAVLGTNKLKATKRDSATVITPFKFSA | |
Retrocopy | LSATKMNVRFSAATKVNEYKRSLTKTPARKSPHVSISGNTPKGQAVLGTNKLKATKRDSATVITPFKFSA |
Parental | EAAQTPVSNKKPVFDLKASLSRPLNYEPHKGKLKPWGQSKENKSLNEHVSRVSFHKYTYKQPRLQTREEQ |
EAAQTPVSNKKPVFDLKASLSRPLNYEPHKGKLKPWGQSKENK.LNEHVSRVSFHK.TYKQPRLQTREEQ | |
Retrocopy | EAAQTPVSNKKPVFDLKASLSRPLNYEPHKGKLKPWGQSKENKCLNEHVSRVSFHKKTYKQPRLQTREEQ |
Parental | RKKHEQQRKEKKAEVLGTRRGLIMAAD |
.KKHEQQRKEKKAEVLGTRRGLIMAAD | |
Retrocopy | WKKHEQQRKEKKAEVLGTRRGLIMAAD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000010774 | 1 retrocopy | |
Canis familiaris | ENSCAFG00000009538 | 3 retrocopies | |
Cavia porcellus | ENSCPOG00000012875 | 1 retrocopy | |
Cavia porcellus | ENSCPOG00000020956 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000009782 | 1 retrocopy |
retro_mluc_389 ,
|
Mustela putorius furo | ENSMPUG00000008844 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000034763 | 1 retrocopy | |
Tupaia belangeri | ENSTBEG00000014283 | 1 retrocopy |