Parental gene:

NUSAP1, ENSBTAG00000010774

Aliases:None
Description:Nucleolar and spindle-associated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q2YDJ0]
Organism:Cow (Bos taurus)
Coordinates:10:36906001..36936265(+)


>ENSBTAG00000010774
ATGATCGTTCCCTCCCTGGAGGAGCTGAACTCCTTCAAGTACAGTGACCTGCAGAACTTGGCCAAGAGTCTGGGCCTCCG
GGCTAACCTCAGGGCAGATAAGCTGTTAAGGGCCTTAAAAGCTCACCTTAAAAATGAAGCAAGAAAAGAAAATGAAAATC
AGGATGAAATTCAAACTTCTGCATCCTCTTGTGATGAGCCTGAGATACAGACCAGCAGCCAGGAACAAGCTGAGAGGGAG
CCGGATGACCATGTCACCAAAACCAGAGGAAGGCGTAAGACTGTCCACAGGAGCCCTGACTCGCAGGCAAATGGAAATGT
GCAAACTGAAAAGAAGCTACCACCTGTGCCCAATCTGCAGAATCATTCAGAGATAAAACTATGTGGCCCTACTAAATCCC
AGAATCAAGAAAAGCATGAAAACCAGGTTCTCAGAACTGCTGTAGAAGTTCCTTCTTTACCCAACGAGAGTCAAGGAGAT
GAGAATACGGTGTCCTCAGGAAAACATGGAATAGATGGTAATGAAGATCCAAGGGTACCTTCAAAAAGAAAGAAGTCTCT
CTACACAGATGGGTTTTCCAAACCTGGAAAAAATAAAACTGCAAGCACTACTCCAAACTTTAAGAAGCTTCATGAGGCTC
GTTTTAAGGAAATGGAGTCCATTGATCAATATGTTGAGAGAAAAAAGAAACATTTTGAAGAACACAATTCATTTAATGAA
CTGAAGGTTCTCCAGAGGCAGCCCGTCACTAAGGGAGTGCCGGCAACTCCAGTTCCTGCCCGAGGAAGACTCTCTGTGGC
TTGTACCCCTGGCAGCCAGCGGCGCTCGCAAGGCCGGCCCCACGCAGGCCGGAGCACCTTGTGTGTGAAGGGGTCAGCCA
AGCGCTCTGCTCTCTCGGCAGCTAAGATGAATGTCAGGTTTTCAGCTGCTACTAAAGATAATGAGCATAAGCGTTCACTG
ACCAAGACTCCAGCCAGAAAGTCTCCACATGTGACCACGTCTGTGAATACCCCAAAAGGCCAGGCTGTGCTTGGGACACA
CAAGTTAAAGACCACAAGGGGTGAATCTGTTGCTGTTATTACCCCATTCAAGTTGACAACTGAAGCATCGCAGACTCCAA
TCTCCCATAAAAAACCAGTGTTTGATCTCAAAGCAAGTTTGTCTCGTCCTCTCAACTATGAGCCACACAAAGGAAAACTG
AAACCATGGGGACAGTCTAAAGAGAACAATTCTCTACATGAGCATGTCAACAGAGTTAGCTTCCACAAGAAAACTTATAA
ACAACCTCGTCTCCAGACCAGGGAGGAGCAACGAAAGAAACATGAGCGGGAGCGAAAGGAGAAGAAAGAAAAGGTCCTGG
GAGTTCGAAGGGGCCTCATTATAGCTGAACGTTCATAA

Library Parental gene expression (RPM)
SRP017611_brain 1 .74 RPM
SRP017611_kidney 2 .25 RPM
SRP017611_liver 0 .83 RPM
ERP005899_muscle 13 .99 RPM
ERP005899_liver 3 .10 RPM
SRP030211_testis 55 .69 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000009538 ortholog_one2one 3 retrogenes
retro_cfam_1685, retro_cfam_2137, retro_cfam_578,
Cavia porcellus ENSCPOG00000012875 ortholog_one2many 1 retrogene
retro_cpor_993,
Cavia porcellus ENSCPOG00000020956 ortholog_one2many 1 retrogene
retro_cpor_258,
Myotis lucifugus ENSMLUG00000009782 ortholog_one2many 1 retrogene
retro_mluc_389,
Mustela putorius furo ENSMPUG00000008844 ortholog_one2many 1 retrogene
retro_mputfur_1626,
Otolemur garnettii ENSOGAG00000034763 ortholog_one2many 1 retrogene
retro_ogar_3125,
Tupaia belangeri ENSTBEG00000014283 ortholog_one2many 1 retrogene
retro_tbel_4088,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1714 97.85 100.00
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Download FASTA sequences of all ENSBTAG00000010774 retrocopies