>retro_mluc_718
CCTCAGGGAATAGGCTCTCCCAGTGTGTACCACGCAGTCATCATCATCTTTTTGGAGTTTTTTGCTTGGGGATTATTGAC
GGCACCCACGTTGGTGATGTTACATGAAACCTTCCCTAAACATACATTTCTGATGAATGGCCTGATTCAAGGAGTCAAGG
GTCTGCTGTCCTTCCTCAGCGCCCCACTCATTGGTGCTCTTTCTGACGTCTGGGGCCGGAAGTCCTTCTTGCTGCTGACA
GTGTTTTTCACCTGCGCCCCGATCCCTTTAATGATGATCAGCCCATGGTGGTACTTTGCCGTCATCTCTGTGTCTGGGGT
GTTTGCAGTGACGTTCTCCGTGGTGTTCGCATACGTGGCGGACATAACCCAAGAGCATGAAAGAAGCATGGCCTATGGAC
AGGTCTCCGCCACGTTTGCCGCGAGCTTGGTGATCAGCCCTGCCATCGGCGCATACTTGGGCCAGGTGTATGGCGACAGC
CTGGTGGTGGTCCTGGCGACAGCGATCGCGCTGCTGGACATTTGCTTCATCCTGGTGGCTGTGCCTGAGAAGATGCGGCC
CGTATCCTGGGGGGCACCCAACTCCTGGGAGCAGGCCAACCCCTTCGCATCCTTGAAGAAGGTGGGCCAGGACTCCATCA
TGCTGCTCATCTGCATCACTGTGTTCCTCTCCTACCTCCCAGAGGCAGGCCAGTACTCCAGCTTCTTCCTGTACCTCAGG
CAGATAATGAAGTTTTCACCAGAAAGTGTCGCGGCCTTTATCGCAGTCCTCGGCATCCTCTCCATCATTGCACAGACCAT
AGTCTTGAGTTTACTCATGAGATCCATTGGAAATAAGAACACCATTTTGTTGGCCTGGGATTTCAAATCTTACAGCTGGC
ATGTATGGCTTCTGTTCAGAACCTTGGATGATGTGGGCCGCAGTGGCCATGGCCGCCATGTCCAGTATCACCCTTCCTGC
CATCAGTGAGCTCGTGTCCCGAACTGCTGATGCCGACCAACAAGGTGTTGTTCAAGGGATGATAACAGGAATTCGGGGGC
TGTGCAACGGTCTGGGACCAGCTCTCTACGGGTTCATTTTCTACTTATTCCACGTGGAACTGAAAGAGCTGCCAATGACA
GGAACGGACTTGGGGACAAACACCAGCCCACAGCACCACTTTGAACAGAACTCCATCATCCCTGGCCCGCCCTTCCTCTT
TGGAGCCTGTTCGGTGCTGCTGGCTCTGCTGGTGGCCTTGTTTATCCCGGAACACACCAACCTAAGCCTGCGGGCCAGCA
GCTGGAGGAAGCACTGTGGCGGCCATAGCCACCCTCATAGCACACAGGCGCCAGGAGTTGCCAAAGAACCCTTACTCCAG
GACACAAACGTG
ORF - retro_mluc_718 Open Reading Frame is not conserved.
Retrocopy - Parental Gene Alignment summary:
Percent Identity: |
94.83 % |
Parental protein coverage: |
98.72 % |
Number of stop codons detected: |
0 |
Number of frameshifts detected |
2 |
Retrocopy - Parental Gene Alignment:
Parental | PQGIGSPSVYHAVIVIFLEFFAWGLLTAPTLVVLHETFPKHTFLMNGLIQGVKGLLSFLSAPLIGALSDV |
| PQGIGSPSVYHAVI.IFLEFFAWGLLTAPTLV.LHETFPKHTFLMNGLIQGVKGLLSFLSAPLIGALSDV |
Retrocopy | PQGIGSPSVYHAVIIIFLEFFAWGLLTAPTLVMLHETFPKHTFLMNGLIQGVKGLLSFLSAPLIGALSDV |
|
Parental | WGRKSFLLLTVFFTCAPIPLMKISPWWYFAVISVSGVFAVTFSVVFAYVADITQEHERSMAYGQVSATFA |
| WGRKSFLLLTVFFTCAPIPLM.ISPWWYFAVISVSGVFAVTFSVVFAYVADITQEHERSMAYGQVSATFA |
Retrocopy | WGRKSFLLLTVFFTCAPIPLMMISPWWYFAVISVSGVFAVTFSVVFAYVADITQEHERSMAYGQVSATFA |
|
Parental | ASLVISPAIGAYLGRVYGDSLVVVLATAIALLDICFILVAVPESLPEKMRPASWGAPISWEQADPFASLK |
| ASLVISPAIGAYLG.VYGDSLVVVLATAIALLDICFILVAVPE....KMRP.SWGAP.SWEQA.PFASLK |
Retrocopy | ASLVISPAIGAYLGQVYGDSLVVVLATAIALLDICFILVAVPE----KMRPVSWGAPNSWEQANPFASLK |
|
Parental | KVGQDSIVLLICITVFLSYLPEAGQYSSFFLYLRQIMKFSPESVAAFIAVLGILSIIAQTIVLSLLMRSI |
| KVGQDSI.LLICITVFLSYLPEAGQYSSFFLYLRQIMKFSPESVAAFIAVLGILSIIAQTIVLSLLMRSI |
Retrocopy | KVGQDSIMLLICITVFLSYLPEAGQYSSFFLYLRQIMKFSPESVAAFIAVLGILSIIAQTIVLSLLMRSI |
|
Parental | GNKNTILL-GLGFQILQLA-WYGFGSEPWMMWAAGAVAAMSSITFPAVSALVSRTADADQQGVVQGMITG |
| GNKNTILL.GLGFQILQLA..YGF.SEPWMMWAA.A.AAMSSIT.PA.S.LVSRTADADQQGVVQGMITG |
Retrocopy | GNKNTILL<GLGFQILQLA<MYGFCSEPWMMWAAVAMAAMSSITLPAISELVSRTADADQQGVVQGMITG |
|
Parental | IRGLCNGLGPALYGFIFYIFHVELKELPMTGTDLGTNTSPQHHFEQNSIIPGPPFLFGACSVLLALLVAL |
| IRGLCNGLGPALYGFIFY.FHVELKELPMTGTDLGTNTSPQHHFEQNSIIPGPPFLFGACSVLLALLVAL |
Retrocopy | IRGLCNGLGPALYGFIFYLFHVELKELPMTGTDLGTNTSPQHHFEQNSIIPGPPFLFGACSVLLALLVAL |
|
Parental | FIPEHTNLSLRSSSWRKHCGGHSHPHSTQAPGEAKEPLLQDTNV |
| FIPEHTNLSLR.SSWRKHCGGHSHPHSTQAPG.AKEPLLQDTNV |
Retrocopy | FIPEHTNLSLRASSWRKHCGGHSHPHSTQAPGVAKEPLLQDTNV |
|
Legend:
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Myotis lucifugus was not studied using RNA-Seq expression data.
Myotis lucifugus was not studied using ChIP-Seq data.
Myotis lucifugus was not studied using EST data.
Myotis lucifugus was not studied using FANTOM5 data.
retro_mluc_718 was not experimentally validated.
Retrocopy orthology:
Myotis lucifugus does not belong to any of the species groups (eutheria, teleost or neognath), studied for retrocopy-based homology. For more information about studied groups, please go to
help section.
Parental genes homology:
Parental genes homology involve
5 parental genes, and
5 retrocopies.