RetrogeneDB ID: | retro_mmur_442 | ||
Retrocopylocation | Organism: | Mouse Lemur (Microcebus murinus) | |
Coordinates: | GeneScaffold_315:160253..160687(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ITGB1BP1 | ||
Ensembl ID: | ENSMICG00000002359 | ||
Aliases: | None | ||
Description: | integrin beta 1 binding protein 1 [Source:HGNC Symbol;Acc:23927] |
Percent Identity: | 72.67 % |
Parental protein coverage: | 73. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 4 |
Parental | KGKKRHSSSSSQSSEISTKSKSVDSSLGG-LSRSSTVASLDTDSTKSSGQSNNNSDTCAEFRIKYVGAIE |
K..K.H.SS..QSSEISTKS.SVDS.LGG.LS.SS.VASL.TDSTKSSGQSN.NSD...EF....VGA.. | |
Retrocopy | KKAKQHRSSNFQSSEISTKSTSVDSTLGG<LSPSSAVASLNTDSTKSSGQSNKNSDASEEF*RQSVGAFG |
Parental | KLKLSEGKCLEGPLDLINYIDVAQQDGKLPFVPLEEEFIMGVSKYGI-KVSTSDQY-DVLHRHAL-YLII |
KL.LSEGK.LEGP.DL.NYIDVAQQDGK.P.VPLEEEFIMGVS..G..KVSTS.Q..D.LHRHAL..LII | |
Retrocopy | KLELSEGKNLEGP*DLMNYIDVAQQDGKVPSVPLEEEFIMGVSQFGV<KVSTSHQW<DILHRHAL<PLII |
Parental | RMVCYDDGLG |
.MV.YDDG.G | |
Retrocopy | QMVFYDDGGG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |