RetrogeneDB ID: | retro_mmur_808 | ||
Retrocopylocation | Organism: | Mouse Lemur (Microcebus murinus) | |
Coordinates: | scaffold_101263:1374..1663(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | TMEM243 | ||
Ensembl ID: | ENSMICG00000014707 | ||
Aliases: | None | ||
Description: | transmembrane protein 243, mitochondrial [Source:HGNC Symbol;Acc:21707] |
Percent Identity: | 79.8 % |
Parental protein coverage: | 83.05 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | LFGETSAKDRIINLVVGSLTSLLILVTLISAFVFPQLPPKPLNIFFAVCISLSSITACILIYWYRQGDLE |
LFGET.AKD..INLVVGSLTSLLILVTLISAF.FPQLP.KPLNIFFAVCISLS.ITACI..YWY.QGDLE | |
Retrocopy | LFGETLAKD*FINLVVGSLTSLLILVTLISAFAFPQLPEKPLNIFFAVCISLS-ITACIVTYWY*QGDLE |
Parental | PKFRKLIYYIIF-CIIMLCICANLYFHDV |
PKFR....Y..F..I..LCIC.NLYFHDV | |
Retrocopy | PKFRNPT-YCVF>IIMLLCICVNLYFHDV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Choloepus hoffmanni | ENSCHOG00000004888 | 4 retrocopies | |
Microcebus murinus | ENSMICG00000014707 | 1 retrocopy |
retro_mmur_808 ,
|
Otolemur garnettii | ENSOGAG00000000023 | 2 retrocopies | |
Rattus norvegicus | ENSRNOG00000042758 | 1 retrocopy | |
Sorex araneus | ENSSARG00000002439 | 1 retrocopy | |
Tupaia belangeri | ENSTBEG00000007846 | 3 retrocopies |