RetrogeneDB ID: | retro_sara_32 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | scaffold_227238:1385..1664(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSSARG00000000474 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSARG00000002439 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 96.74 % |
Parental protein coverage: | 98.92 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | DRIINLVVGGLTSLLILVTLISAFVFPQLPPKPLNIFFAVCISLSSITACILIYWYRQGDLEPKFRNLIY |
DRIINLVVGGLTSLLILVTLIS.FVFPQLPPKPLNIFFAVCISL.SITACILIYWYRQGDLE.KFRNLIY | |
Retrocopy | DRIINLVVGGLTSLLILVTLISTFVFPQLPPKPLNIFFAVCISLGSITACILIYWYRQGDLELKFRNLIY |
Parental | YILFSIIMLCICANLYFHDVGK |
YILFSIIMLCICANLYFHDVGK | |
Retrocopy | YILFSIIMLCICANLYFHDVGK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Choloepus hoffmanni | ENSCHOG00000004888 | 4 retrocopies | |
Microcebus murinus | ENSMICG00000014707 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000000023 | 2 retrocopies | |
Rattus norvegicus | ENSRNOG00000042758 | 1 retrocopy | |
Sorex araneus | ENSSARG00000002439 | 1 retrocopy |
retro_sara_32 ,
|
Tupaia belangeri | ENSTBEG00000007846 | 3 retrocopies |