>retro_mputfur_1010
GCAGCAGCCGTGCGGCAGGACTTAGCCCAGCTCCTGAACTCGAGCGGCTCTCACAAAGATCCGGTGGGCAAGTACTGTCA
GATCCCGGAAAAAGCCGTTCCGTTATCTGGGGCAGAACAACTAGAAGCTTTGAAAGCTTTTGTGGAAGCAATGGTAAGTG
AGAATGTCAGTCTCGTGATCTCTCGACAGTTGCTAACTGATTTCTGTACACATCTCCCTAACCTGCCTGACAGCACAGCC
AAAGAAATCTATCTTTTCACCTTGGAAAAGATCCAGCCGAGAGTCATTTCATTTGAGGAGCAGGTTGCGTCAATAAGACA
GCATCGTGCATCCATATATGAGAAAGAAGAAGCTTGGAGAAATGCAGCCCAAGTGTTGGTGGGAATTCCCTTGGAAACAG
GACAAAAGCAGTACAATGTAGATTATAAACTGGAGACTCACCTGAAGATTGCGAGGCTATAGCTGGAAGATGACGATCCC
GTCCAGGCAGAGGCTTACATAAATCGAGCATCATTGCTTCAGAATGAATCCACCAATGGGCAGTTACAGATACACTATAA
GGTATGCTATGCACCTGTTCTCAATCAGAGAAGAAAATTCATTGAAGCTGCACAAGGTACAATGAGCTCTCTTACAAGAC
AATAAGTCTTACAAGACTAGAGGCCTTGAAACATGCTTTGTACTGTACCATCTTGGCATCAGCAGGACAGCAGCGGATGC
TAGCCACTCTTTTTAAGGATGAAAGGTGCCAGCAACTTGCTGCTTATGGGATCCTAGAGAAAATGTACCTAGACAGGATC
ATCAGAGGAAATCAACTTCAAGAGTTTGCGGCCATGCTAATGTCTCACCAAAAAGCAACTACCACTGATGGTTCTAGCAT
CTTGGACAGAGCTGTTATTGAACATAATTTGTTGTCTGCAAACAAATTATATAATATCACCTTTGAAGAACTTGGAGCTC
TTTTAGAGATCCCTGCAGCTAAGGCAGAAAAAATAGCATCACAAATGATAACAGAAGGACGTATGAATGGATTTATTGAT
CAGATTGATGGAATAGTTCATTTTGAAACATGGGAAGCCCTGCCAATGTGGGACAAACAGATCCAGTCCCTTTGTTTCCA
AGTGAATAACCTGCTGGAGAAGATCAGTCAAACGGCGCCAGAGTGGACAGCACAGGCCATGGAGGGGCAGATGGCTCAG
ORF - retro_mputfur_1010 Open Reading Frame is not conserved.
Retrocopy - Parental Gene Alignment summary:
Percent Identity: |
91.87 % |
Parental protein coverage: |
99.75 % |
Number of stop codons detected: |
1 |
Number of frameshifts detected |
1 |
Retrocopy - Parental Gene Alignment:
Parental | AAAVRQDLAQLMTSSGSHKDLAGKYRQILEKAVQLSGAEQLEALKAFVEAMVNENVSLVISRQLLTDFCT |
| AAAVRQDLAQL..SSGSHKD..GKY.QI.EKAV.LSGAEQLEALKAFVEAMV.ENVSLVISRQLLTDFCT |
Retrocopy | AAAVRQDLAQLLNSSGSHKDPVGKYCQIPEKAVPLSGAEQLEALKAFVEAMVSENVSLVISRQLLTDFCT |
|
Parental | HLPNLPDSTAKEIYHFTLEKIQPRVISFEEQVASIRQHLASIYEKEEDWRNAAQVLVGIPLETGQKQYNV |
| HLPNLPDSTAKEIY.FTLEKIQPRVISFEEQVASIRQH.ASIYEKEE.WRNAAQVLVGIPLETGQKQYNV |
Retrocopy | HLPNLPDSTAKEIYLFTLEKIQPRVISFEEQVASIRQHRASIYEKEEAWRNAAQVLVGIPLETGQKQYNV |
|
Parental | DYKLETYLKIARLYLEDDDPVQAEAYINRASLLQNESTNEQLQIHYKVCYARVLDYRRKFIEAAQ-RYNE |
| DYKLET.LKIARL.LEDDDPVQAEAYINRASLLQNESTN.QLQIHYKVCYA.VL..RRKFIEAAQ.RYNE |
Retrocopy | DYKLETHLKIARL*LEDDDPVQAEAYINRASLLQNESTNGQLQIHYKVCYAPVLNQRRKFIEAAQ<RYNE |
|
Parental | LSYKTIVHESERLEALKHALHCTILASAGQQRSRMLATLFKDERCQQLAAYGILEKMYLDRIIRGNQLQE |
| LSYKTI.....RLEALKHAL.CTILASAGQQ..RMLATLFKDERCQQLAAYGILEKMYLDRIIRGNQLQE |
Retrocopy | LSYKTI--SLTRLEALKHALYCTILASAGQQ--RMLATLFKDERCQQLAAYGILEKMYLDRIIRGNQLQE |
|
Parental | FAAMLMPHQKATTADGSSILDRAVIEHNLLSASKLYNNITFEELGALLEIPAAKAEKIASQMITEGRMNG |
| FAAMLM.HQKATT.DGSSILDRAVIEHNLLSA.KLY.NITFEELGALLEIPAAKAEKIASQMITEGRMNG |
Retrocopy | FAAMLMSHQKATTTDGSSILDRAVIEHNLLSANKLY-NITFEELGALLEIPAAKAEKIASQMITEGRMNG |
|
Parental | FIDQIDGIVHFETREALPTWDKQIQSLCFQVNNLLEKISQTAPEWTAQAMEAQMAQ |
| FIDQIDGIVHFET.EALP.WDKQIQSLCFQVNNLLEKISQTAPEWTAQAME.QMAQ |
Retrocopy | FIDQIDGIVHFETWEALPMWDKQIQSLCFQVNNLLEKISQTAPEWTAQAMEGQMAQ |
|
Legend:
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Mustela putorius furo was not studied using RNA-Seq expression data.
Mustela putorius furo was not studied using ChIP-Seq data.
No EST(s) were mapped for retro_mputfur_1010 retrocopy.
Mustela putorius furo was not studied using FANTOM5 data.
retro_mputfur_1010 was not experimentally validated.
Retrocopy orthology:
Mustela putorius furo does not belong to any of the species groups (eutheria, teleost or neognath), studied for retrocopy-based homology. For more information about studied groups, please go to
help section.
Parental genes homology:
Parental genes homology involve
5 parental genes, and
7 retrocopies.