RetrogeneDB ID: | retro_mputfur_1096 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL897012.1:6430696..6431111(-) | ||
Located in intron of: | ENSMPUG00000011137 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | C8orf33 | ||
Ensembl ID: | ENSMPUG00000005972 | ||
Aliases: | None | ||
Description: | chromosome 8 open reading frame 33 [Source:HGNC Symbol;Acc:26104] |
Percent Identity: | 53.9 % |
Parental protein coverage: | 59.66 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 2 |
Parental | KQTKKKSRNGASVANGGGQVSEEPVSEEAPVSAEAQAEQLARELAWCVDQLELGLKMQRPSPRQKEQAAG |
K..KKK.RN.AS..N..G........E.A..SAEAQ..QLA.ELA.C..QLELGL.M.RPS..QK..A.G | |
Retrocopy | KKQKKKTRNKASATNAIGSPLKSGALEDALLSAEAQVDQLAPELA*CMGQLELGLEMLRPSLKQKV*AVG |
Parental | AIRT-LRSERTPLP-RKRQLMRSLFGDYRAQMEAERREALRVLRTAARAAQVQPVGEAARKKNGRVCRPR |
AI...L..E.TP.P.R.R.LM.SLFGD.R.Q.EA.....L.VLR.AA...Q.QPV.....KK..RVCRP. | |
Retrocopy | AIPS<LPNESTPMP<RRR*LMCSLFGDCRDQTEAHGAQNLWVLRAAACIGQEQPVTRPLEKKSQRVCRPI |
Parental | Q |
Q | |
Retrocopy | Q |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Dasypus novemcinctus | ENSDNOG00000015805 | 3 retrocopies | |
Macaca mulatta | ENSMMUG00000016084 | 1 retrocopy | |
Monodelphis domestica | ENSMODG00000028791 | 2 retrocopies | |
Mustela putorius furo | ENSMPUG00000005972 | 1 retrocopy |
retro_mputfur_1096 ,
|
Rattus norvegicus | ENSRNOG00000034107 | 1 retrocopy |