>retro_mputfur_1193
CAGGAAGGAGGTAGTCATGAGGTCTTTCAAGAGTTGAAAGGCATATGTATTGCTCTAGGAATGTCCAATCCTCCAGCCAA
TATAACTATGTTCCAGTTCTTCAGTGGGATTGAAAAAAATTAAAGGAGACATTAGCAAAGGTTCCACTTAACCATGTGGA
AAGCCTTTATTGAAGAAACCAATGAGACCAGCCCACTGGGAAAACAAAGAAGCAGTTAACCAGGCCATAGCTAATGAACA
TGAAGTTCTGAGAAAGCTGCTATTAAAAGGCTTAGATGTCACTGTCCAGTCTTTTGGTTGGTCTGACAGAGCTAAGAGTC
AGACAGAAAAAATAGCAAAGGTTTACCAGCTGAAATGCTCAGTCCTATCTCCTAAAAGTATTATTTCTGTTCCCATGTTT
TGGCTATAAGACAAGACTCATCAAAGATTTTAAGGACAAGCAGTAACTCTATAAAAGAAAAGACTGCCTTGGCCATCAAT
AAAATGTTGTTGGGTAGGGTGCCTGACAGAGGAGGTAGACCCAATGAAATTGGACCTCTACCTCCAGAGATGCCACCATG
GCAGAAAAGGTAAGACGGCCCCCAACAACAAGCAGGAGGCCAACAAGGAGGAGAGGTGGTTATGAACATTCCTCATATGA
AGGTCGAGGAGGTCATGAACAAAGAGGAGGGAGAGGTGGGTGCGGTGGCTATGACCATGATAGCTAGGGGGAGGGAGAGA
AAATAAGCATCAAGGAGGCTGGACGGATGGAGAGAATGGAAAAGGAGGTGGTGGCTACCAAGATGGTGGTCATCGAGATT
CGGGTTTCCAGCCAGGTGGCTATCATGGTGGTGGCTGCTGTGGTAGCTATCAAGGTGATGGTTATGGTGACTTCCAAACA
TCTACATACATAAAAAGTGGATACTGGGGTAGTGGATACCAGCAGGACAGTAGATACCAAGATGGTGGTCACCATGGTGA
CTGAGGCAGTGGTCGTGGAGGGAGAAGTGGTTGTAGAAGCCAAGGTGGATGTGGAGGCCAGAAAGAAGTTGGGGAGGAAG
GGGGAGCCAGAATTATCACCAAGGGGCCCAATTTGAATAGCACTTCCAGCATGGAGGTTATCAGTGTAATCATTTTGGAT
TTGATCAGGGAAGACATTATCCTAGT
ORF - retro_mputfur_1193 Open Reading Frame is not conserved.
Retrocopy - Parental Gene Alignment summary:
Percent Identity: |
81.28 % |
Parental protein coverage: |
74.08 % |
Number of stop codons detected: |
3 |
Number of frameshifts detected |
6 |
Retrocopy - Parental Gene Alignment:
Parental | QEGGGSEVFQELKGICIALGMSKPPANITMFQFFSGIEK-KLKETLAKVPPNHV-GKPLLKKPMGPAHWE |
| QEGG..EVFQELKGICIALGMS.PPANITMFQFFSGIEK.KLKETLAKVP.NHV.GKPLLKKPM.PAHWE |
Retrocopy | QEGGSHEVFQELKGICIALGMSNPPANITMFQFFSGIEK<KLKETLAKVPLNHV<GKPLLKKPMRPAHWE |
|
Parental | KIEAINQAIANEYEVRRKLLIKRLDVTVQSFGWSDRAKSQTEKLAKVYQPKRSVLSPKSTISV-AHLLAA |
| ..EA.NQAIANE.EV.RKLL.K.LDVTVQSFGWSDRAKSQTEK.AKVYQ.K.SVLSPKS.ISV..H.LA. |
Retrocopy | NKEAVNQAIANEHEVLRKLLLKGLDVTVQSFGWSDRAKSQTEKIAKVYQLKCSVLSPKSIISV<SHVLAI |
|
Parental | RQDLSKILRTSSGSIREKTACAINKVLMGRVPDRGGRPNEIEPPPPEMPPWQKRQDGPQQQAGGRGGG-R |
| RQD.SKILRTSS.SI.EKTA.AINK.L.GRVPDRGGRPNEI.P.PPEMPPWQKR.DGPQQQAGG..GG.R |
Retrocopy | RQDSSKILRTSSNSIKEKTALAINKMLLGRVPDRGGRPNEIGPLPPEMPPWQKR*DGPQQQAGGQQGG<R |
|
Parental | GGYEHSSYGGRGGHEQGGGRGGRGGYDHGS-RGGGRGNKHQGGWTDGGSG-GGGGYQDGGYRDSGFQPGG |
| GGYEHSSY.GRGGHEQ.GGRGG.GGYDH.S..GGGR.NKHQGGWTDG..G.GGGGYQDGG.RDSGFQPGG |
Retrocopy | GGYEHSSYEGRGGHEQRGGRGGCGGYDHDS<LGGGRENKHQGGWTDGENGKGGGGYQDGGHRDSGFQPGG |
|
Parental | YHGGSHSGSYQGGGYGGFQTSTYTGSGYQGGGYQQDNRYQDGGHHNDRGSGRGGRGGRGGRGGRGGQ-GG |
| YHGG...GSYQG.GYG.FQTSTY..SGY.G.GYQQD.RYQDGGHH.D.GSGRGGR.G....GG.GGQ... |
Retrocopy | YHGGGCCGSYQGDGYGDFQTSTYIKSGYWGSGYQQDSRYQDGGHHGD*GSGRGGRSGCRSQGGCGGQ<ER |
|
Parental | GWGGRGSQNYHQGGQFEQHFQHGGYQYNHSGFGQGRHYTS |
| .WGGRGSQNYHQG.QFE.HFQHGGYQ.NH.GF.QGRHY.S |
Retrocopy | SWGGRGSQNYHQGAQFE*HFQHGGYQCNHFGFDQGRHYPS |
|
Legend:
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Mustela putorius furo was not studied using RNA-Seq expression data.
Mustela putorius furo was not studied using ChIP-Seq data.
No EST(s) were mapped for retro_mputfur_1193 retrocopy.
Mustela putorius furo was not studied using FANTOM5 data.
retro_mputfur_1193 was not experimentally validated.
Retrocopy orthology:
Mustela putorius furo does not belong to any of the species groups (eutheria, teleost or neognath), studied for retrocopy-based homology. For more information about studied groups, please go to
help section.
Parental genes homology:
Parental genes homology involve
4 parental genes, and
5 retrocopies.