RetrogeneDB ID: | retro_mputfur_634 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL896928.1:13725042..13725535(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | NMRK1 | ||
Ensembl ID: | ENSMPUG00000012337 | ||
Aliases: | None | ||
Description: | nicotinamide riboside kinase 1 [Source:HGNC Symbol;Acc:26057] |
Percent Identity: | 68.42 % |
Parental protein coverage: | 83.42 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 5 |
Parental | MKTFVIGISGVTNGGKTT-LAKKLQKHLPNCSVISQDDFFKPQSEIETDTNGFLQYDVLEALNMEKMMSA |
MKTFVIG.S.VTNG.KTT..AK.LQ..LPNCS.ISQDDFFKP..E.ET.T.GFLQYDVL.ALNMEKM... | |
Retrocopy | MKTFVIGVSTVTNGRKTT<MAKNLQNYLPNCSIISQDDFFKPEYEKETNTDGFLQYDVLKALNMEKMIPT |
Parental | ISRWMESPRHSPVSTDSGSTE-EIP-ILIIEGFLLFNYKPLDALWNRSYFLTIPYEECKRRRSTRVYEPP |
IS.W..SPRHS...TDS.....E.P.ILII.GFLLFNYKPLD.LWNRSYFLTI.YEE.KRRRS...YEPP | |
Retrocopy | ISCWTKSPRHSLLPTDSVNAK<EFP<ILIIKGFLLFNYKPLDTLWNRSYFLTILYEEYKRRRSIKLYEPP |
Parental | D-VPGYFDGHVWPMYLKHRQEIE-NITWEII |
D..P.YFDGH....Y.K.R.E.E..I.WE.. | |
Retrocopy | D<PPMYFDGHM*SRYIKPREEME<DIRWETL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000005312 | 1 retrocopy | |
Felis catus | ENSFCAG00000028823 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000009787 | 1 retrocopy | |
Mustela putorius furo | ENSMPUG00000012337 | 1 retrocopy |
retro_mputfur_634 ,
|
Pteropus vampyrus | ENSPVAG00000006121 | 1 retrocopy | |
Tupaia belangeri | ENSTBEG00000004063 | 2 retrocopies | |
Tarsius syrichta | ENSTSYG00000004232 | 1 retrocopy |