RetrogeneDB ID: | retro_tsyr_718 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_18074:17832..18117(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | NMRK1 | ||
Ensembl ID: | ENSTSYG00000004232 | ||
Aliases: | None | ||
Description: | nicotinamide riboside kinase 1 [Source:HGNC Symbol;Acc:26057] |
Percent Identity: | 73.2 % |
Parental protein coverage: | 53.01 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | NGGKTTLATNLQKCLPNCDVISQDDFFKPESEIETDKNGFLQYDVLEALNMEKMMSAISCWMESPRHSLV |
NG.KTTLA.NLQK.LPNC.V.SQDDF.KP.S.IETDKN..L.YD..EALN.EKMM.AISCW.ESPRHSLV | |
Retrocopy | NGRKTTLAKNLQKQLPNCSVLSQDDFYKPWSDIETDKNEWLPYD--EALNIEKMMPAISCWVESPRHSLV |
Parental | STNWKNAEEIPILIIEGFLLFNYKPLD |
.T.W...EEIP.LIIE.FL..NYKPL. | |
Retrocopy | PTDW*GTEEIPVLIIEHFLPVNYKPLE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000005312 | 1 retrocopy | |
Felis catus | ENSFCAG00000028823 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000009787 | 1 retrocopy | |
Mustela putorius furo | ENSMPUG00000012337 | 1 retrocopy | |
Pteropus vampyrus | ENSPVAG00000006121 | 1 retrocopy | |
Tupaia belangeri | ENSTBEG00000004063 | 2 retrocopies | |
Tarsius syrichta | ENSTSYG00000004232 | 1 retrocopy |
retro_tsyr_718 ,
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