RetrogeneDB ID: | retro_nleu_100 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397796.1:103..1249(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSNLEG00000019345 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSNLEG00000001941 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 98.51 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | GTGDIIAVMITELRGKDILSYLEKNISVQMTIAVGTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYF |
GTGDIIAVMITELRGKDILSYLEKNISVQMTI.VGTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYF | |
Retrocopy | GTGDIIAVMITELRGKDILSYLEKNISVQMTISVGTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYF |
Parental | IQKIRYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILPCKHVFH |
IQKIRYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILPCKHVFH | |
Retrocopy | IQKIRYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILPCKHVFH |
Parental | KSCVDPWLSEHCTCPMCKLNILKALGIVPNLPCTDNVAFDMERLTRTQAVNRRSALGDLAGDNTLGLEPL |
KSCVDPWLSEHCTCPMCKLNILKALGIVPNLPCTDNVAFDMERLTRTQAVNRRSALGDLAG.N.LGLEPL | |
Retrocopy | KSCVDPWLSEHCTCPMCKLNILKALGIVPNLPCTDNVAFDMERLTRTQAVNRRSALGDLAGENSLGLEPL |
Parental | RTSGISPLPQDGELTPRTGEINIAVTKEWFIIASFGLLSALTLCYMIIRATASLNANE |
RTSGISPLPQDGELTPRTGEINIAVTKEWFIIASFGLLSALTLCYMIIRATASL.ANE | |
Retrocopy | RTSGISPLPQDGELTPRTGEINIAVTKEWFIIASFGLLSALTLCYMIIRATASLTANE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Loxodonta africana | ENSLAFG00000008735 | 3 retrocopies | |
Nomascus leucogenys | ENSNLEG00000001941 | 1 retrocopy |
retro_nleu_100 ,
|
Nomascus leucogenys | ENSNLEG00000003149 | 1 retrocopy | |
Sus scrofa | ENSSSCG00000014013 | 3 retrocopies |