RetrogeneDB ID: | retro_nleu_2118 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397329.1:11474425..11474911(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PRDX3 | ||
Ensembl ID: | ENSNLEG00000016698 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 64.67 % |
Parental protein coverage: | 63.67 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 4 |
Parental | YLVLFFYPLDFTFVCPTEIVAFSDKANEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSD |
Y..LF.YPL.FTFVCPTEI.A.S.KAN.FH.VNCE..AVSVDSH..H.....TPRK...LGH.NI.LLSD | |
Retrocopy | YFMLFSYPLAFTFVCPTEIIALSEKANTFHNVNCEAGAVSVDSHENHHV*VYTPRK-ASLGHTNIVLLSD |
Parental | LTKQISRDYGVLLEGSGLALRGLFIID-PNG-VIKHLSVNDLPV-GRSVEETLRLVKAFQYVETH-GEVC |
L.KQIS.DY.VL..G..L.L.GLFIID.P.G...K.LSVNDLPV.G.S.EET..LVKAFQ.VE.H..EVC | |
Retrocopy | LNKQIS*DYDVLVGGPDLPLAGLFIID>PSG>IFKYLSVNDLPV<G*SMEETAFLVKAFQLVEIH<REVC |
Parental | PANWTPDSPTIKPNPAASKEYFQKVNQ |
.AN....S.T.KPNP.ASKE.F.K..Q | |
Retrocopy | LAN*ILSSSTTKPNPTASKECFEKKSQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |