RetrogeneDB ID: | retro_nleu_2998 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397563.1:513806..514406(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | TAF11 | ||
Ensembl ID: | ENSNLEG00000008457 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 58.33 % |
Parental protein coverage: | 75.84 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | SPSDKGGETGESDETAAAPGDPGATDTDGIPEETDGDADADLKEAAAEEGELKSQDVSDLTTVEREDSSL |
SP...G..TG.S.E..A.P........DGIP...DG.....L.E..A.EGEL.SQDV.DLT....E.S.. | |
Retrocopy | SPMETGRQTGVSAEMLAMPQSLKGSNKDGIPDDPDGH----LEELRAQEGELSSQDVTDLTEGDNEASAS |
Parental | LTPAAKKLKIDTKEKKEKKQKVDEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLIQSITGTSV |
..P.AK..K.DTK.KK..K..VD..E.Q.M..L.S..SEEQL.RYE..RRSAFPKA.I..L.QSITG.SV | |
Retrocopy | PPPTAKRRKRDTKGKKDRKPTVDAEEAQRMATLLSAMSEEQLARYEAFRRSAFPKARIAALMQSITGRSV |
Parental | SQNVVIAMSGISKVFVGEVVEEALDVCEKWGEMPPLQPKHMREAVRRLKSKGQIPNSKHKKIIF |
..NV.IAM.GI.K.F..EV.EEALDVCE.WGEMPPLQP.H.REAVRRLK.KG..PNS..KKI.F | |
Retrocopy | PENVAIAMAGIAKLFIREVLEEALDVCEMWGEMPPLQPNHLREAVRRLKPKGLFPNSNYKKIMF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |