Parental gene:

TAF11, ENSG00000064995

Aliases:TAF11, MGC:15243, TAF2I, TAFII28
Description:TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa [Source:HGNC Symbol;Acc:11544]
Organism:Human (Homo sapiens)
Coordinates:6:34845554..34855866(-)


>ENSG00000064995
ATGGACGATGCCCACGAGTCGCCCTCCGACAAAGGTGGAGAGACAGGGGAGTCGGATGAGACGGCCGCTGTGCCCGGGGA
CCCGGGGGCTACCGACACCGATGGAATCCCAGAGGAAACTGACGGAGACGCAGATGTGGACTTGAAAGAAGCTGCAGCGG
AGGAAGGCGAGCTCGAGAGTCAGGATGTCTCAGATTTAACAACAGTTGAAAGGGAAGACTCATCATTACTTAATCCTGCA
GCCAAAAAACTGAAAATAGATACCAAAGAAAAGAAAGAGAAAAAGCAGAAAGTAGATGAAGATGAGATTCAGAAGATGCA
AATCCTGGTTTCTTCTTTTTCTGAGGAGCAGCTGAACCGTTATGAAATGTATCGCCGCTCAGCTTTCCCTAAGGCAGCCA
TCAAAAGGCTGATCCAGTCCATCACTGGCACCTCTGTGTCTCAGAATGTTGTTATTGCTATGTCTGGTATTTCCAAGGTT
TTCGTCGGGGAGGTGGTAGAAGAAGCACTGGATGTGTGTGAGAAGTGGGGAGAAATGCCACCACTACAACCCAAACATAT
GAGGGAAGCCGTTAGAAGGTTAAAGTCAAAAGGACAGATCCCTAACTCGAAGCACAAAAAAATCATCTTCTTCTAG

Library Parental gene expression (RPM)
bodymap2_adipose 13 .80 RPM
bodymap2_adrenal 31 .36 RPM
bodymap2_brain 17 .91 RPM
bodymap2_breast 18 .74 RPM
bodymap2_colon 20 .01 RPM
bodymap2_heart 13 .05 RPM
bodymap2_kidney 16 .67 RPM
bodymap2_liver 11 .09 RPM
bodymap2_lung 16 .77 RPM
bodymap2_lymph_node 22 .70 RPM
bodymap2_ovary 19 .62 RPM
bodymap2_prostate 23 .57 RPM
bodymap2_skeletal_muscle 10 .53 RPM
bodymap2_testis 28 .36 RPM
bodymap2_thyroid 24 .61 RPM
bodymap2_white_blood_cells 21 .07 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000016887 ortholog_one2one 1 retrogene
retro_btau_218,
Callithrix jacchus ENSCJAG00000015388 ortholog_one2one 5 retrogenes
retro_cjac_1342, retro_cjac_1980, retro_cjac_2310, retro_cjac_2402, retro_cjac_2657,
Cavia porcellus ENSCPOG00000015428 ortholog_one2one 1 retrogene
retro_cpor_629,
Dipodomys ordii ENSDORG00000009352 ortholog_one2many 1 retrogene
retro_dord_4,
Equus caballus ENSECAG00000016725 ortholog_one2one 1 retrogene
retro_ecab_83,
Felis catus ENSFCAG00000022931 ortholog_one2one 1 retrogene
retro_fcat_1628,
Loxodonta africana ENSLAFG00000011482 ortholog_one2one 1 retrogene
retro_lafr_1108,
Microcebus murinus ENSMICG00000014063 ortholog_one2one 1 retrogene
retro_mmur_1196,
Myotis lucifugus ENSMLUG00000001766 ortholog_one2one 1 retrogene
retro_mluc_87,
Nomascus leucogenys ENSNLEG00000008457 ortholog_one2one 29 retrogenes
retro_nleu_149, retro_nleu_151, retro_nleu_152, retro_nleu_1742, retro_nleu_1743, retro_nleu_2976, retro_nleu_2977, retro_nleu_2998, retro_nleu_3041, retro_nleu_3042, retro_nleu_3043, retro_nleu_3044, retro_nleu_3049, retro_nleu_3050, retro_nleu_3051, retro_nleu_3053, retro_nleu_3054, retro_nleu_3055, retro_nleu_3081, retro_nleu_3082, retro_nleu_3083, retro_nleu_3084, retro_nleu_3093, retro_nleu_3094, retro_nleu_3109, retro_nleu_3113, retro_nleu_3120, retro_nleu_3125, retro_nleu_3127,
Otolemur garnettii ENSOGAG00000008522 ortholog_one2one 2 retrogenes
retro_ogar_3055, retro_ogar_922,
Pongo abelii ENSPPYG00000016521 ortholog_one2one 1 retrogene
retro_pabe_200,
Pan troglodytes ENSPTRG00000018075 ortholog_one2one 9 retrogenes
retro_ptro_2123, retro_ptro_2124, retro_ptro_2125, retro_ptro_2126, retro_ptro_2127, retro_ptro_2128, retro_ptro_2129, retro_ptro_2130, retro_ptro_2977,
Tursiops truncatus ENSTTRG00000007855 ortholog_one2one 1 retrogene
retro_ttru_1063,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_3139 60.78 96.68
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_hsap_3140 61.76 96.68
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_hsap_3141 56.37 96.68
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_hsap_3142 57.35 96.68
Please wait, loading
Please wait, loading
Please wait, loading
5. retro_hsap_3143 56.86 96.68
Please wait, loading
Please wait, loading
Please wait, loading
6. retro_hsap_3144 56.86 96.68
Please wait, loading
Please wait, loading
Please wait, loading
7. retro_hsap_3145 58.33 96.68
Please wait, loading
Please wait, loading
Please wait, loading
8. retro_hsap_3146 59.31 96.68
Please wait, loading
Please wait, loading
Please wait, loading
9. retro_hsap_3147 57.35 96.68
Please wait, loading
Please wait, loading
Please wait, loading
10. retro_hsap_3148 56.37 96.68
Please wait, loading
Please wait, loading
Please wait, loading
11. retro_hsap_3149 55.50 94.31
Please wait, loading
Please wait, loading
Please wait, loading
12. retro_hsap_3295 56.86 96.68
Please wait, loading
Please wait, loading
Please wait, loading
13. retro_hsap_3296 56.86 96.68
Please wait, loading
Please wait, loading
Please wait, loading
14. retro_hsap_3297 56.37 96.68
Please wait, loading
Please wait, loading
Please wait, loading
15. retro_hsap_3298 56.86 96.68
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSG00000064995 retrocopies