RetrogeneDB ID: | retro_pcap_359 | ||
Retrocopylocation | Organism: | Hyrax (Procavia capensis) | |
Coordinates: | scaffold_4846:3695..3917(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSPCAG00000011842 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 67.53 % |
Parental protein coverage: | 58.46 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MVLNSLDKMIQLQKNTANIRNICVLAHVDHGKTTLADCLISSNGIISSRLAGKF-YMDSREDEQIRGITM |
MVLNS.DK.IQLQ..TA.IRNICVLAHV.HGKTTLA.CL.......S...AGK..YM.SR.DE.I.GITM | |
Retrocopy | MVLNS*DKIIQLQTTTAGIRNICVLAHVGHGKTTLANCLAVES---SLHVAGKLRYMESRQDERIQGITM |
Parental | KSSAISL |
KS..ISL | |
Retrocopy | KSTDISL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Myotis lucifugus | ENSMLUG00000001470 | 1 retrocopy | |
Procavia capensis | ENSPCAG00000011842 | 1 retrocopy |
retro_pcap_359 ,
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