RetrogeneDB ID: | retro_pvam_205 | ||
Retrocopylocation | Organism: | Megabat (Pteropus vampyrus) | |
Coordinates: | GeneScaffold_1862:229869..230197(+) | ||
Located in intron of: | ENSPVAG00000010252 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ARPP19 | ||
Ensembl ID: | ENSPVAG00000004012 | ||
Aliases: | None | ||
Description: | cAMP-regulated phosphoprotein, 19kDa [Source:HGNC Symbol;Acc:16967] |
Percent Identity: | 67.24 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 3 |
Parental | MSAEVPEAASAEEQKEMED-KVTSPEKAEEAKLKARYPHLGQKPGGSDFLRKRLQKGQKYFDSGDYNMAK |
MS.EVPEA..A..Q...E..K....EKAEEAKLKARYPHLGQKPG.SDFLRK.LQKGQKYF.SGDYNMA. | |
Retrocopy | MSVEVPEA--ASVQEQKEM>KIK*LEKAEEAKLKARYPHLGQKPGDSDFLRK*LQKGQKYFNSGDYNMA- |
Parental | AKMKNKQLPAAAA-PDKTEVTGDHIPTPQDLPQRKPSL-VASKLAG |
.K.K.K......A.P....VT.DHIPTP.DLP..KPSL.VASKL.G | |
Retrocopy | -KAKMKSKQLPTA>PRRRQVTSDHIPTPRDLPPWKPSL<VASKLDG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Dipodomys ordii | ENSDORG00000011321 | 2 retrocopies | |
Gorilla gorilla | ENSGGOG00000025250 | 1 retrocopy | |
Macaca mulatta | ENSMMUG00000008344 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000013865 | 1 retrocopy | |
Pongo abelii | ENSPPYG00000006487 | 2 retrocopies | |
Pteropus vampyrus | ENSPVAG00000004012 | 1 retrocopy |
retro_pvam_205 ,
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