RetrogeneDB ID: | retro_sara_205 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | GeneScaffold_7054:13245..13641(-) | ||
Located in intron of: | ENSSARG00000002089 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PRADC1 | ||
Ensembl ID: | ENSSARG00000003050 | ||
Aliases: | None | ||
Description: | protease-associated domain containing 1 [Source:HGNC Symbol;Acc:16047] |
Percent Identity: | 100. % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | HTRYEQIHLVPAEPPEACGELSNGFFIQDQIALVERGGCSFLSKTRVVQEYGGRAVIISDNAVDNDSFYV |
HTRYEQIHLVPAEPPEACGELSNGFFIQDQIALVERGGCSFLSKTRVVQEYGGRAVIISDNAVDNDSFYV | |
Retrocopy | HTRYEQIHLVPAEPPEACGELSNGFFIQDQIALVERGGCSFLSKTRVVQEYGGRAVIISDNAVDNDSFYV |
Parental | EMIQDSTQRTADIPALFLLGRDGYMIRRSLEQHGLPWAIISIPVNVTSIPTFELLQPPWTFW |
EMIQDSTQRTADIPALFLLGRDGYMIRRSLEQHGLPWAIISIPVNVTSIPTFELLQPPWTFW | |
Retrocopy | EMIQDSTQRTADIPALFLLGRDGYMIRRSLEQHGLPWAIISIPVNVTSIPTFELLQPPWTFW |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Homo sapiens | ENSG00000135617 | 1 retrocopy | |
Gorilla gorilla | ENSGGOG00000007761 | 1 retrocopy | |
Pan troglodytes | ENSPTRG00000012059 | 1 retrocopy | |
Sorex araneus | ENSSARG00000003050 | 1 retrocopy |
retro_sara_205 ,
|
Tarsius syrichta | ENSTSYG00000003210 | 1 retrocopy |