RetrogeneDB ID: | retro_shar_723 | ||
Retrocopylocation | Organism: | Tasmanian devil (Sarcophilus harrisii) | |
Coordinates: | GL861617.1:1083713..1083901(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CCDC25 | ||
Ensembl ID: | ENSSHAG00000018434 | ||
Aliases: | None | ||
Description: | coiled-coil domain containing 25 [Source:HGNC Symbol;Acc:25591] |
Percent Identity: | 65.62 % |
Parental protein coverage: | 85.14 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MGKDKYENEDLIKYGWPEDIWFHVDKLSSAHVYLRLHKG-ERIEDIPKEVLMDCAHLVKANSIQ |
MGKDK.ENEDLIK.GWPEDIW..VDKLSS.H.Y.....G.ER.EDI.K...M..AH.V.A.SIQ | |
Retrocopy | MGKDKHENEDLIKHGWPEDIWHYVDKLSSVHIYILVTPG<ERAEDISKKMMMNYAHVVRAKSIQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Pongo abelii | ENSPPYG00000018468 | 2 retrocopies | |
Sarcophilus harrisii | ENSSHAG00000018434 | 1 retrocopy |
retro_shar_723 ,
|