Parental gene: | CCDC25, ENSPPYG00000018468 |
| Aliases: | None |
| Description: | Coiled-coil domain-containing protein 25 [Source:UniProtKB/Swiss-Prot;Acc:Q5R9S1] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 8:27568788..27607501(-) |
>ENSPPYG00000018468
ATGGTGTTCTACTTCACCAGCAGCAGCGTTAATTCATCTGCCTACACTATTTACATGGGAAAAGACAAATATGAAAATGA
AGATCTGATCAAGCATGGCTGGCCTGAAGATATCTGGTTTCATGTGGACAAACTCTCTTCGGCTCATGTATACCTTCGAT
TACATAAGGGAGAGAATATAGAAGACATCCCAAAGGAAGTGCTGATGGACTGTGCCCACCTTGTGAAGGCCAATAGCATT
CAAGGCTGCAAGATGAACAACGTTAATGTGGTATATACGCCGTGGTCTAACCTGAAGAAAACAGCTGACATGGATGTGGG
GCAGATAGGCTTTCACAGGCAGAAGGATGTAAAAATTGTGACAGTGGAGAAGAAAGTAAATGAGATCCTGAACCGATTAG
AAAAGACCAAAGTCGAGCGGTTCCCAGACCTAGCAGCAGAGAAAGAATGCAGAGATCGTGAAGAGAGGAATGAGAAAAAA
GCCCAAATTCAGGAAATGAAAAGGAGAGAAAAAGAAGAAATGAAGAAGAAGAGGGAAATGGATGAACTTAGGAGCTATTC
ATCACTAATGAAAGTTGAAAATATGTCTTCAAATCAGGATGGCAATGATTCAGATGAATTCATGTAA
ATGGTGTTCTACTTCACCAGCAGCAGCGTTAATTCATCTGCCTACACTATTTACATGGGAAAAGACAAATATGAAAATGA
AGATCTGATCAAGCATGGCTGGCCTGAAGATATCTGGTTTCATGTGGACAAACTCTCTTCGGCTCATGTATACCTTCGAT
TACATAAGGGAGAGAATATAGAAGACATCCCAAAGGAAGTGCTGATGGACTGTGCCCACCTTGTGAAGGCCAATAGCATT
CAAGGCTGCAAGATGAACAACGTTAATGTGGTATATACGCCGTGGTCTAACCTGAAGAAAACAGCTGACATGGATGTGGG
GCAGATAGGCTTTCACAGGCAGAAGGATGTAAAAATTGTGACAGTGGAGAAGAAAGTAAATGAGATCCTGAACCGATTAG
AAAAGACCAAAGTCGAGCGGTTCCCAGACCTAGCAGCAGAGAAAGAATGCAGAGATCGTGAAGAGAGGAATGAGAAAAAA
GCCCAAATTCAGGAAATGAAAAGGAGAGAAAAAGAAGAAATGAAGAAGAAGAGGGAAATGGATGAACTTAGGAGCTATTC
ATCACTAATGAAAGTTGAAAATATGTCTTCAAATCAGGATGGCAATGATTCAGATGAATTCATGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 24 .16 RPM |
| SRP007412_cerebellum | 14 .35 RPM |
| SRP007412_heart | 7 .59 RPM |
| SRP007412_kidney | 15 .58 RPM |
| SRP007412_liver | 9 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000012971 | ortholog_one2one | 2 retrogenes | |
| Dipodomys ordii | ENSDORG00000006595 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000006478 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000147419 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000009685 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000015976 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000020109 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000018434 | possible_ortholog | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000000732 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_477 | 89.62 | 50.48 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_1364 | 85.96 | 54.81 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000018468 retrocopies