RetrogeneDB ID: | retro_tbel_3886 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_27759:2032..2295(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSTBEG00000014395 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000012532 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 75.82 % |
Parental protein coverage: | 78.26 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | EEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYE-DIFDAKNACDHLSGFNVCNRYLVVLYYNANRAFQKM |
...YDIFG.YG.I..IRVGNT.ETRGTAY.VY..DIFDAKNAC.HLSGF..CNRYLVV.YYNAN...QKM | |
Retrocopy | KKVYDIFG*YGHIC*IRVGNTLETRGTAYTVYK<DIFDAKNACNHLSGFSICNRYLVVSYYNANSSLQKM |
Parental | DTKKKEEQLKLLKEKYGINTD |
DTKKK..QLKLLKEK.GINT. | |
Retrocopy | DTKKK--QLKLLKEKHGINTE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Choloepus hoffmanni | ENSCHOG00000000689 | 3 retrocopies | |
Myotis lucifugus | ENSMLUG00000002473 | 1 retrocopy | |
Tupaia belangeri | ENSTBEG00000012532 | 5 retrocopies |