RetrogeneDB ID: retro_tnig_26

Retrocopy location

• Organism: Tetraodon (Tetraodon nigroviridis)
• Coordinates: 14:10143589..10149394(-)
• Located in intron of: None

Retrocopy information

• Ensembl ID: ENSTNIG00000004795
• Aliases: None
• Status: KNOWN_PSEUDOGENE

Parental gene information

• Parental gene symbol: None
• Ensembl ID: ENSTNIG00000003838
• Aliases: None
• Description: None

Sequence

>retro_tnig_26
ATGAGCGACTCCCTGATGGCCGAGTTTGGAAAGGCTGCTCCGTACCTGAGGAAGTCAGAAAAGGAGCGCCTGGAAGCCCA
GACCAGAGCGTTTGACATCAAGACGGAATGTTTTGTTGTGGATGAGAAGGTGGAATACGTGAAGGGGCAGATCCAGAGCA
GAGACGGAGGGATGGTGACAGTCCGGAGGGAGGACGGAGCTACAGTGAGCGTTCCGGAGTCGGGCGTCCACCCCCAGAAC
CCGCCCAAGTTTGATAAAATCGAAGACATGGCCATGTTCACCTTCCTCCATGAGCCGGCGGTGCTGTTTAATCTGAAGGA
GCGCTACGCTGCCTGGATGATCTACACCTACTCGGGGCTATTCTGCGTCACCGTCAACCCCTATAAGTGGCTTCCAGTCT
ACGACGCCGAGGTGGTGGCCGCCTACAGGGGGAAAAAGCGCTCGGAAGCGCCCCCCCACATCTTCTCCATCTCCGATAAC
GCCTACCAGTACATGCTGAGCGACCGGGAGAACCAGTCGGTGCTCATCACAGGAGAATCTGGAGCCGGTAAGACTGTCAA
CACCAAGAGGGTGATCCAATACTTCGCCAGCATCGCTGCCGTCGGCGGTAGCAGCAGGAAGGATGCCAGTAAGGGGACTC
TGGAGGACCAGATCATCCAGGCCAACCCGGCCCTGGAGGCCTTCGGCAACGCCAAAACGGTGAGAAACGACAATTCTTCC
CGCTTCGGGAAATTCATCCGAATCCATTTTGGTCCAAGTGGAAAACTGTCGTCCGCTGACATCGAGACCTACCTGCTGGA
GAAAGTCCAGGGTCACCTTCCAGCTGAAGGCTGAGAGGAACTACCACATCTTCTACCAGATCCTCGTCCAACCAGAAGCC
GGAACTTCTGGACCTGACTGCTCATCACCAGCAACCCGTATGACTACTCCTACATCTCCCAAGGAGAGGTGACGGTGGCC
TCCATCAACGACTCGGAGGAGCTGATGGCCACTGACAGTGCCTTTGACGTGCTGGGCTTCACGCCGGAGGAGAAGATGGG
CGTGTACAAACTGACGGGCGCCATCATGCACTACGGTAACATGAAGTTCAAGCAAAGGCAGCGCGAGGAGCAGGCTGAGC
CGGACGGGACGGAGGCTGCCGATAAGTCTGCCTACCTCATGGGCCTGAATTCCTCCGACCTGATCAAGGGGTTGTGCCAC
CCCCGGGTCAAAGTGGGGAACGAATACGTCACCAAAGGCCAGAGTGTGGACCAGGTCTACTACGCCCTCGGCGCTCTCGC
CAAGTCCGTGTATGAAAAGATGTTCAACTGGATGGTGGTGCGGATCAACCAATCCCTGGACACCAAACAGCACCGGCAGT
ACTTCATCGGCGTTCTGGACATCGCAGGCTTTGAGATCTTTGACTTCAACACCTTCGAGCAGCTCTGCATTAACTTCACC
AATGAAAAACTGCAACAGTTTTTCAACCATCACATGTTCGTTCTGGAGCAGGAGGAGTACAAGAAGGAGGGAATCGACTG
GGAGTTCATCGACTTCGGCATGGACCTACAGGCTTGTATCGACCTGATTGAAAAACCGCTGGGAATTCTCTCCATTCTGG
AGGAGGAGTGCATGTTCCCCAAAGCCAGCGACCAGACCTTCAAGTCCAAGCTCTACGACAACCATCTGGGAAAGAACAAG
ATGTTTGAAAAACCGAGAGCAGCTAAGGGGAGAGCGGAGGCCCACTTTGCCCTGGTCCACTACGCTGGGACGGTGGACTA
CAACATCACCAACTGGCTGGTCAAAAACAAAGACCCTCTGAACGAAACCGTGGTCGGTCTTTACCAGAAGTCCTCTCTGA
AACTCCTCAGTTTGCTGTTTTCCACCTACTCATCTGACAGCAGCGACAAAGGAGGCAGCAAAGGAGCCAAGAAGAAAGGT
TCCTCCTTCCAGACGGTGTCGGCTCTCCACAGGGAAAACCTCAACAAGCTGATGACCAACCTGAAGACCACACACCCCCA
CTTCGTACGCTGCCTGATCCCCAACGAGCGGAAGAGTCCAGGCGTGATGGACAACTGCCTGGTCATGCACCAGCTGCGCT
GTAATGGAGTTCTGGAAGGGATCCGGATCTGCAGGAAGGGCTTCCCCAACCGTGTCCTGTACGGTGACTTTAAGCAGCGC
TACCGCATCCTGAATGCCGCCGCCATCCCCGAGGGCCAATTCATTGACTGCAAGAAGAGCGCTGAGAAGTTACTGGGATC
TCTGGACATTGACCATACCCAGTACAAGTTTGGCCACACCAAGGTCTTCTTCAAGGCTGGTTTACTTGGAACGCTGGAGG
AGATGAGAGACGAGCAGCTCTCCCGGATACTCACCAGGATCCAGGCTAATGCCCGAGGAATCCTCATGAGGGCACGCTTC
GCTAAGATGGTGGAACAGCGAGATGCTCTCATGGTCATCCAGTGGAACCTTCGCTCCTTCTTGGGTGTGAAAAACTGGCC
CTGGATGAAGCTCTTCTTCAAGATCAAGCCCCTGCTGAAGAGCGCTGAGGCAGAGAAGGAAATGGCCAGCATGAAGGACG
AGTTCAACAAGCTGAAAGAAGCTCTGGAAAAATCCGAGAGCAGGCGGAAAGAACTGGAGGAGAAGATAGTGACTCTCCTC
CAAGAGAAGAACAACCTGACCCTGCAGATCCAGTCGGAACAGGACACGCTCACAGACGCCGAAGAGCGCTGCGAACAGCT
GATAAAGAGCAAGATCCATCTGGAGGCCAAGCTGAAAGAGATGGCAGAGAGGCTGGAGGATGAGGAGGAGATGAACGCAG
ATCTCACTGCCAAGAGACGCAAGCTGGAAGACGAGTGTTCCGAGCTGAAGAAGGACATAGATGACCTGGAGCTGACGCTG
GCAAAGGTGGAGAAAGAGAAACACGCAACCGAAAACAAGGTGAAGAACCTGATTGAGGAGATGGCCTCGCAGGACGCAAC
CATCGCCAAGCTAAGCAAGGAGAAGAAGGCGCTGCAGGAGGCTCACCAGCAAACCTTGGACGACCTCCAGAGCGAAGAAG
ATAAAGCCAACAGTTTGAGCAAAGCCAAAGCTAAGCTGGAGCAGCAGGTGGATGATCTGGAGGGCTCCCTGGAGCAGGAG
AAGAAGGTCAGGATGGACATGGAGCGATCCAAGAGGAAGCTGGAAGGAGACCTGAAGCTGCTGCAGGAGAGTATGATGGA
CCTGGACAACGACAAACAGCAGCTGGAGGAGAAGCTCAAGAAGAAGGACTTTGAGACTGTCCAGCTGAACTCCAGGCTGG
AGGACGAGCAAGCAGCTGCAAGCCAGCTTCAGAAGAAGCTGAAGGAGAGTCAGGCCAGGATGGAGGAGCTGGAGGAGGAG
CTGGAAGCCGAACGTGCGGCTCGAGCCAAGGTGGAGAAGCAGCGTGCTGACCTGTCCCGCGAGCTGGAGGACATCAGCGA
GCGCCTGGAAGAGGCCGGAGGAGCAACCTCGGCACAAGCGGAGCTCAACAAAAAGAGAGACGCCGAGTTTCAGAAGCTGC
GGCGGGAACTGGAGGAGCTGACGCTGCAGCACGAGTCCACGGCGGCCGCCCTCAGGAAGAAGCACGCCGACAGTGTGGCC
GAGCTGGGCGAGCACATCGACAACCTCCAGAGGGTGAAGCAGAAGCTGGAGAAGGAGAAGAGGGAGCTGAAACTGGAACT
GGACGACTTGTGCTCCAACGTGGAGACGCTGGTCAAGGCCAAGTCCAACGCGGAGAAGATGTGTCGCGCCATGGAAGACG
GCATGAACGAGCACAAGCACCAGCAGGACGAAGCCCAGAGGAGCATCGGCGAGCTGAGCTCACACAGGGCCAAGCTCCTG
AGCGAGAGCGCCGAGCTGGCGCGCCGCCTAGAGGAGAAGGAGAGTCTGGTTTCCCAGCTGAGCAGAGCCAAGGTCTCCTA
CAAGCAGCAGGCCGAAGATCTGCGCAGACAGCTGGACGAGGAAGCAAAGGCCAAGAGCGCGCTGGCTCATGCCGTCCAGT
CCGCTCGCCACGACTGCGACCTGCTCCGCGAGCAGTTGGAGGAGGAGCAGGAGGCCAAAGCCGAGCTGCAGCGAGCTCTT
TCCAGGGCCAACGCCGAGGTCTCCACCTGGAGGAGCAGGTACGAAAGCGATGGGATCCAGAGAGCCGAGGAACTGGAAGA
AGCAAAGAAGAAGTTGGTTCAGAGGCTTCAGGAGGCCGAGGAGGCCGTGGAGGCGGCCAACGCCAAGTCTTCCTCTCTGG
AGAAAACCAAACAGCGGCTCCAGGCCGAGATGGAGGACCTGATGGTGGACCTGGAGAGGTCCAATGCAGCGTCTGCAGCC
CTGGACAAGAAGCAGAGACTGTTTGACAAGACTCTAGCCGAGTGGAAGCAGAAGTTCGAGGAGTCTCAGTGTGAGCTGGA
GGCCTCGCAGAAGGAGGCTCGTTCTCTCAGCACCGAGCTCTTCAAGCTGAAGAACGCCTACGAAGAATGCCTCGAACACC
TGGAGACCATGAAGAGAGAGAACAAGAACCTGCAGGAGGAGATTTCGGAACTCAGCGAGCAGCTCGGAGAAGGTGGGAGG
AGCGCCCACGAGCTGGAGAAGGCGAGGAAGCAGCTGGAGCAGGAAAGAGCGGAGCTGCAGGCGGCGTTGGAGGAGGCGGA
AGGCTCTCTGGAGCACGAGGAGAGCAAGATCCTTCAATCCCAGCTGGAGCTCAACCAGGTCAAGGCTGATGTGGAGCGAA
AGCTGTCGGAAAAAGACGAAGAGATGGAGCAGGCCAAGAGGAACTACCAGCGTGTGCTGGACTCCCTGCAGGCCTCGCTG
GAGTCTGAAACCAGGAGCCGCAACGAGGCCTTGAGAGTCAAGAAGAAGATGGAGAGCGACCTCAACGAGATGGAGATCCA
GCTGAGCCAAGCAAACAGACAGGCCGCCGAGGGCCAGAAGCAGGTCAGGAGCCTGCAGGCCTCCCTCAAGGATCTCCAGA
CGCAGCTGGACGAGGCGCACCACGCCAACCAAGACAGCAGGGAGAACGCCGCCCTCCTGGAGCGCCGACACAACCTGCTG
CAGGCCGAGCTGGAGGAGGTCCGAGCAGCCCTGGAGCAGATGGACAGAAGCCGCAAGCTGGCCGAGCAGGAGCTGAGCGA
GGCCAGCGAGCGCGTGCAGCTCCTGCATGCTCAGAACACCAGCCTGATCAACCAGAAGAAGAAGCACGAGGCAGACCTGC
TGCAGCTGCAGGCCGAGGCGGAGGAGGCCGTCCAGGAAGAGCGCAACGCCGAGGAGAAAGCCAAGAAGGCCATCAATGAC
GCCGCTGTGATGGCCGAGGAGCTGAAGAAGGAGCAGGACACCTGCGCCCACCTAGAGCGCATGAAGAGGAACATGGAGCA
GACCATCAAAGACCTCCAGCAGCGGCTGGACGAGGCCGAGCAGGTGGCCATGAAGGGCGGCAAGAAGCAGCTCCACAAGC
TGGAGGCCCGCATCAAAGAGCTGGAGGCAGAGCTGGAGGCGGAGCAACGACGAGGAACCGAGTCCACCAAGGGGATCCGC
AAGTACGAGCGGCGCATCAAGGAGCTCGCCTACCAGAGCCAGGAGGACCGCAAGAACCTGGGCCGCCTCCAGGAGCTGGT
GGACAAGCTGCAGCTCAAGGTCAAGTCCTACAAACGAGCTGGCGAGGAGGCGGAGGAGGCGGCCGCCGCCAACGCCGCCA
AACTGCGCAAGCTGCAGCACCAGCTGGAGGAGGCCGAGGAGAGGGCCGACATGGCCGAGGCCCAGGCCGGCAAGCTGAAG
GCCAGGAGCCGGGACGGCGGCGGCGCCGCCAAGGGCCTGGACGAG

Alignment

ORF - retro_tnig_26 Open Reading Frame is not conserved.

Retrocopy - Parental Gene Alignment summary:

• Percent Identity: 79.29 %
• Parental protein coverage: 99.95 %
• Number of stop codons detected: 0
• Number of frameshifts detected: 3

Retrocopy - Parental Gene Alignment:

Parental  MGDAAMAEFGAAAPYLRKSEKERLEAQTRTFDMKKECFVPDPEIEYVKASVTSRDGDKVTVNTESGKTVT
          M.D..MAEFG.AAPYLRKSEKERLEAQTR.FD.K.ECFV.D...EYVK....SRDG..VTV..E.G.TV.
Retrocopy MSDSLMAEFGKAAPYLRKSEKERLEAQTRAFDIKTECFVVDEKVEYVKGQIQSRDGGMVTVRREDGATVS

Parental  VKECDVHPQNPPKFDKIEDMAMFTFLHEPAVLYNLKERYAAWMIYTYSGLFCVTVNPYKWLPVYNQEVVV
          V.E..VHPQNPPKFDKIEDMAMFTFLHEPAVL.NLKERYAAWMIYTYSGLFCVTVNPYKWLPVY..EVV.
Retrocopy VPESGVHPQNPPKFDKIEDMAMFTFLHEPAVLFNLKERYAAWMIYTYSGLFCVTVNPYKWLPVYDAEVVA

Parental  AYRGKKRTEAPPHIFSISDNAYQYMLADRENQSILITGESGAGKTVNTKRVIQYFASIAAVP-SGKKDTS
          AYRGKKR.EAPPHIFSISDNAYQYML.DRENQS.LITGESGAGKTVNTKRVIQYFASIAAV..S..KD.S
Retrocopy AYRGKKRSEAPPHIFSISDNAYQYMLSDRENQSVLITGESGAGKTVNTKRVIQYFASIAAVGGSSRKDAS

Parental  AEKKGTLEDQIIQANPALEAFGNAKTIRNDNSSRFGKFIRIHFDNRGKLASADIETYLLEK-SRVTYQLK
          ...KGTLEDQIIQANPALEAFGNAKT.RNDNSSRFGKFIRIHF...GKL.SADIETYLLEK.SRVT.QLK
Retrocopy ---KGTLEDQIIQANPALEAFGNAKTVRNDNSSRFGKFIRIHFGPSGKLSSADIETYLLEK>SRVTFQLK

Parental  AERDYHIFYQIL-SQVKPEILEM-LLITNNPYDYAFISQGETTVASINDADELVATDEAFDVLGFTQEEK
          AER.YHIFYQIL.S..KPE.L...LLIT.NPYDY..ISQGE.TVASIND..EL.ATD.AFDVLGFT.EEK
Retrocopy AERNYHIFYQIL>SNQKPELLDL>LLITSNPYDYSYISQGEVTVASINDSEELMATDSAFDVLGFTPEEK

Parental  NSVYKLTGAIMHYGNMKFKQKQREEQAEADGTEDADKAAYLMGLNSADLIKGLCHPRVKVGNEWVTKGQN
          ..VYKLTGAIMHYGNMKFKQ.QREEQAE.DGTE.ADK.AYLMGLNS.DLIKGLCHPRVKVGNE.VTKGQ.
Retrocopy MGVYKLTGAIMHYGNMKFKQRQREEQAEPDGTEAADKSAYLMGLNSSDLIKGLCHPRVKVGNEYVTKGQS

Parental  VAQVYYAIGALSKSVYEKMFLWMVVRINQSLDTKQPRQYFIGVLDIAGFEIFDFNTFEQMCINFTNEKLQ
          V.QVYYA.GAL.KSVYEKMF.WMVVRINQSLDTKQ.RQYFIGVLDIAGFEIFDFNTFEQ.CINFTNEKLQ
Retrocopy VDQVYYALGALAKSVYEKMFNWMVVRINQSLDTKQHRQYFIGVLDIAGFEIFDFNTFEQLCINFTNEKLQ

Parental  QFFNHHMFVLEQEEYKKEGIEWEFIDFGMDLQACIDLIEKPMGIMSILEEECMFPKASDATFKAKLYDNH
          QFFNHHMFVLEQEEYKKEGI.WEFIDFGMDLQACIDLIEKP.GI.SILEEECMFPKASD.TFK.KLYDNH
Retrocopy QFFNHHMFVLEQEEYKKEGIDWEFIDFGMDLQACIDLIEKPLGILSILEEECMFPKASDQTFKSKLYDNH

Parental  LGKSANFQKPRIVKGKPEAHFALMHYAGTVDYNINNWLVKNKDPLNETVVGLYQKSNLKLLSILFANYAG
          LGK...F.KPR..KG..EAHFAL.HYAGTVDYNI.NWLVKNKDPLNETVVGLYQKS.LKLLS.LF..Y..
Retrocopy LGKNKMFEKPRAAKGRAEAHFALVHYAGTVDYNITNWLVKNKDPLNETVVGLYQKSSLKLLSLLFSTYSS

Parental  ADSDTGGKGKGSKKKGSSFQTVSALHRENLNKLMTNLRSTHPHFVRCIIPNETKTPGAMEHPLVMHQLRC
          ..SD.GG..KG.KKKGSSFQTVSALHRENLNKLMTNL..THPHFVRC.IPNE.K.PG.M...LVMHQLRC
Retrocopy DSSDKGGS-KGAKKKGSSFQTVSALHRENLNKLMTNLKTTHPHFVRCLIPNERKSPGVMDNCLVMHQLRC

Parental  NGVLEGIRICRKGFPNRILYGDFKQRYRILNPNAVPEGQFIDNKKAAEKLLGSLDIDHNQYKLGHTKVFF
          NGVLEGIRICRKGFPNR.LYGDFKQRYRILN..A.PEGQFID.KK.AEKLLGSLDIDH.QYK.GHTKVFF
Retrocopy NGVLEGIRICRKGFPNRVLYGDFKQRYRILNAAAIPEGQFIDCKKSAEKLLGSLDIDHTQYKFGHTKVFF

Parental  KAGLLGLLEEMRDDRLALIITGIQARSRGLLARIEFQKIVERRDALLVIQWNVRAFMGVKNWPWMKLYFK
          KAGLLG.LEEMRD..L..I.T.IQA..RG.L.R..F.K.VE.RDAL.VIQWN.R.F.GVKNWPWMKL.FK
Retrocopy KAGLLGTLEEMRDEQLSRILTRIQANARGILMRARFAKMVEQRDALMVIQWNLRSFLGVKNWPWMKLFFK

Parental  IKPLLRSAEAEKEMANMKEEFLKLKEAYAKSEARRKELEEKTVTLLQEKNDLQLQVQSEQDNLCDAEERC
          IKPLL.SAEAEKEMA.MK.EF.KLKEA..KSE.RRKELEEK.VTLLQEKN.L.LQ.QSEQD.L.DAEERC
Retrocopy IKPLLKSAEAEKEMASMKDEFNKLKEALEKSESRRKELEEKIVTLLQEKNNLTLQIQSEQDTLTDAEERC

Parental  EGLIKSKIQLEAKIKELTERLEDEEEMNAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKV
          E.LIKSKI.LEAK.KE..ERLEDEEEMNA.LTAK.RKLEDECSELKKDIDDLELTLAKVEKEKHATENKV
Retrocopy EQLIKSKIHLEAKLKEMAERLEDEEEMNADLTAKRRKLEDECSELKKDIDDLELTLAKVEKEKHATENKV

Parental  KNLTEEMAALDEIIAKLTKEKKALQEAHQQTLDDLQSEEDKVNTLTKAKTKLEQQVDDLEGSLEQEKKVR
          KNL.EEMA..D..IAKL.KEKKALQEAHQQTLDDLQSEEDK.N.L.KAK.KLEQQVDDLEGSLEQEKKVR
Retrocopy KNLIEEMASQDATIAKLSKEKKALQEAHQQTLDDLQSEEDKANSLSKAKAKLEQQVDDLEGSLEQEKKVR

Parental  MDLERAKRKLEGDLKLTQESLMDLENDKQQLEEKLKKKDFEISHLNSKIEDEQAMSAQLQKKLKELQARI
          MD.ER.KRKLEGDLKL.QES.MDL.NDKQQLEEKLKKKDFE...LNS..EDEQA...QLQKKLKE.QAR.
Retrocopy MDMERSKRKLEGDLKLLQESMMDLDNDKQQLEEKLKKKDFETVQLNSRLEDEQAAASQLQKKLKESQARM

Parental  EELEEELEAERAARAKVEKQRADLARELEEISERLEEAGGATTAQIEMNKKREAEFLKLRRDLEEATLQH
          EELEEELEAERAARAKVEKQRADL.RELE.ISERLEEAGGAT.AQ.E.NKKR.AEF.KLRR.LEE.TLQH
Retrocopy EELEEELEAERAARAKVEKQRADLSRELEDISERLEEAGGATSAQAELNKKRDAEFQKLRRELEELTLQH

Parental  EATAAALRKKQADSVADLGEQIDNLQRVKQKLEKEKSELRLELDDVVSNMEQVVKSKANLEKMCRSLEDQ
          E.TAAALRKK.ADSVA.LGE.IDNLQRVKQKLEKEK.EL.LELDD..SN.E..VK.K.N.EKMCR..ED.
Retrocopy ESTAAALRKKHADSVAELGEHIDNLQRVKQKLEKEKRELKLELDDLCSNVETLVKAKSNAEKMCRAMEDG

Parental  MQEYKTKSEEGQRTINDVTIQKAKLQTENGELSRQLEEKDSLVSQLTRGKQSYTQQMEDLKRQLEEEIKA
          M.E.K....E.QR.I.......AKL..E..EL.R.LEEK.SLVSQL.R.K.SY.QQ.EDL.RQL.EE.KA
Retrocopy MNEHKHQQDEAQRSIGELSSHRAKLLSESAELARRLEEKESLVSQLSRAKVSYKQQAEDLRRQLDEEAKA

Parental  KNALAHALQSARHDCDLLREQYEEEQEAKAELQRGMSKANSEVAQWRTKYETDAIQRTEELEEAKKKLAQ
          K.ALAHA.QSARHDCDLLREQ.EEEQEAKAELQR..S.AN.EV..WR..YE.D.IQR.EELEEAKKKL.Q
Retrocopy KSALAHAVQSARHDCDLLREQLEEEQEAKAELQRALSRANAEVSTWRSRYESDGIQRAEELEEAKKKLVQ

Parental  RLQEAEEAVEAVNAKCSSLEKTKHRLQNEIEDLMVDVERSNAAAAALDKKQRNFDKILAEWKQKYEESQS
          RL..........NAK.SSLEKTK.RLQ.E.EDLMVD.ERSNAA.AALDKKQR.FDK.LAEWKQK.EESQ.
Retrocopy RLXXXXXXXXXANAKSSSLEKTKQRLQAEMEDLMVDLERSNAASAALDKKQRLFDKTLAEWKQKFEESQC

Parental  ELEGSQKEARSLSTELFKLKNSFEESLENLETMKRENKNLQEELSDLAEQIVEGTKSIHELEKIRKQLEQ
          ELE.SQKEARSLSTELFKLKN..EE.LE.LETMKRENKNLQEE.S.L.EQ..EG..S.HELEK.RKQLEQ
Retrocopy ELEASQKEARSLSTELFKLKNAYEECLEHLETMKRENKNLQEEISELSEQLGEGGRSAHELEKARKQLEQ

Parental  EKSELQTSLEEAEASLEHEEGKILRIQLEFNQIKAEIERKLGEKDEEMEQAKRNQQRIVDSLQSSLEAET
          E..ELQ..LEEAE.SLEHEE.KIL..QLE.NQ.KA..ERKL.EKDEEMEQAKRN.QR..DSLQ.SLE.ET
Retrocopy ERAELQAALEEAEGSLEHEESKILQSQLELNQVKADVERKLSEKDEEMEQAKRNYQRVLDSLQASLESET

Parental  RSRNEALRLKKKMEGDLNEMEIQLSQANRQAAEAQKQLKSVHAHLKDSQLQLDESLRANDDMKENIAIVE
          RSRNEALR.KKKME.DLNEMEIQLSQANRQAAE.QKQ..S..A.LKD.Q.QLDE...AN.D..EN.A..E
Retrocopy RSRNEALRVKKKMESDLNEMEIQLSQANRQAAEGQKQVRSLQASLKDLQTQLDEAHHANQDSRENAALLE

Parental  RRNNLLQAEVEELRASLEQTERSRKLAEQELLDVSERVQLLHSQNTSLLNHKKKLEADASQLQTEVEEAV
          RR.NLLQAE.EE.RA.LEQ..RSRKLAEQEL...SERVQLLH.QNTSL.N.KKK.EAD..QLQ.E.EEAV
Retrocopy RRHNLLQAELEEVRAALEQMDRSRKLAEQELSEASERVQLLHAQNTSLINQKKKHEADLLQLQAEAEEAV

Parental  QECRNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQIAMKGGKKQVQKL
          QE.RNAEEKAKKAI.DAA.MAEELKKEQDT.AHLERMK.NMEQTIKDLQ.RLDEAEQ.AMKGGKKQ..KL
Retrocopy QEERNAEEKAKKAINDAAVMAEELKKEQDTCAHLERMKRNMEQTIKDLQQRLDEAEQVAMKGGKKQLHKL

Parental  EARIKELESELEAEQRKSCDSVKGIRKYERRIKELTYQTEEDRKNLSRLQDLADKLQLKVKSYKKATEEA
          EARI...........R....S.KGIRKYERRIKEL.YQ..EDRKNL.RLQ.L.DKLQLKVKSYK.A.EEA
Retrocopy EARIXXXXXXXXXXXRRGTESTKGIRKYERRIKELAYQSQEDRKNLGRLQELVDKLQLKVKSYKRAGEEA

Parental  EEQANNNLTKFRKIQHELDEAEERADIAESQVNKLRAKSRD-VGSKKGFEE
          EE.A..N..K.RK.QH.L.EAEERAD.AE.Q..KL.A.SRD..G..KG..E
Retrocopy EEAAAANAAKLRKLQHQLEEAEERADMAEAQAGKLKARSRDGGGAAKGLDE

Legend:

• *: Stop codon
• >: Forward frameshift by one nucleotide
• <: Reverse frameshift by one nucleotide

Expression

RNA-Seq

Tetraodon nigroviridis was not studied using RNA-Seq expression data.

ChIP-Seq

Tetraodon nigroviridis was not studied using ChIP-Seq data.

EST

Tetraodon nigroviridis was not studied using EST data.

TSS

Tetraodon nigroviridis was not studied using FANTOM5 data.

Lab

retro_tnig_26 was not experimentally validated.

Homology

Retrocopy orthology:

Retrocopy retro_tnig_26 has 0 orthologous retrocopies within teleost group .

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Parental genes homology:

Parental genes homology involve 4 parental genes, and 4 retrocopies.

Species	Parental gene accession	Retrocopies number
Danio rerio	ENSDARG00000071430	1 retrocopy	retro_drer_2,
Gadus morhua	ENSGMOG00000009387	1 retrocopy	retro_gmor_5,
Oreochromis niloticus	ENSONIG00000008086	1 retrocopy	retro_onil_30,
Tetraodon nigroviridis	ENSTNIG00000003838	1 retrocopy	retro_tnig_26 ,