RetrogeneDB ID: | retro_tsyr_1738 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_563557:352..770(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTSYG00000006901 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 60.71 % |
Parental protein coverage: | 84.28 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | EVIQS--REIQSRGTRKGWGATQ-VESLNRGGA-GEGRRDHALAHHVFFALIEPNLADREGSEEEVKAGG |
EVIQS..R.....G..KG.......ESLNRGGA.GEGR.DHA.AH..F.ALIE.NLA..E.SEEEVKAGG | |
Retrocopy | EVIQSLGRSSPAEGHGKGGAPPR*QESLNRGGA>GEGRWDHAQAHLAFYALIELNLAEGEVSEEEVKAGG |
Parental | DETVVADLLVNAVYVLGAILKIFLRGNVLN-HSGMDIEKYSKHYQHDHSPGA-EDDAAGGQLRPTAQERR |
DETVVADLL.................NVLN.HSGMDIEKYS.H.Q...SPG..E.DA.G.QL.PTAQERR | |
Retrocopy | DETVVADLLAKMF*MFWGPFSKSFSVNVLN*HSGMDIEKYSEHCQPNRSPGTDEGDATGSQLPPTAQERR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Dasypus novemcinctus | ENSDNOG00000015517 | 1 retrocopy | |
Microcebus murinus | ENSMICG00000014057 | 1 retrocopy | |
Tarsius syrichta | ENSTSYG00000006901 | 2 retrocopies |
retro_tsyr_1105, retro_tsyr_1738 ,
|