RetrogeneDB ID: | retro_tsyr_407 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_111367:4489..4885(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | WASF3 | ||
Ensembl ID: | ENSTSYG00000005184 | ||
Aliases: | None | ||
Description: | WAS protein family, member 3 [Source:HGNC Symbol;Acc:12734] |
Percent Identity: | 59.42 % |
Parental protein coverage: | 51.33 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | INMKKAFKSSTVQDQQVV-SKNSIPNPVADI-YNQSDKPPPLNILTPY-RDDKKDGLKFYTDPSYFFDLW |
INM.K....STVQDQQ....KNSIP.P.ADI.......PP.LNILTP....DK.D..KF..D.SYFFD.W | |
Retrocopy | INMRKTLRGSTVQDQQME<VKNSIPSPAADI<LTSDGSPP-LNILTPH<LHDK-DEMKFWADLSYFFDVW |
Parental | KEKMLQDTEDKRKEKRRQKEQKRIDGTTREVKKVRKARNRRQEWNMMAYDKELRPDNRLSQSVYHGAS |
KE.MLQD.EDKRKEK..Q.EQK..D..T...K.V.K.RNR.QEWN.MA.D.ELRPDN..S.SV....S | |
Retrocopy | KEQMLQDMEDKRKEKKHQQEQKHTDSITCNMKGVKKDRNRCQEWNVMACDNELRPDNKVSRSVLWSTS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Homo sapiens | ENSG00000132970 | 1 retrocopy | |
Gorilla gorilla | ENSGGOG00000012518 | 1 retrocopy | |
Tarsius syrichta | ENSTSYG00000005184 | 3 retrocopies |
retro_tsyr_1561, retro_tsyr_366, retro_tsyr_407 ,
|