RetrogeneDB ID: | retro_tsyr_611 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_14915:8939..9191(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | HMGN2 | ||
Ensembl ID: | ENSTSYG00000011519 | ||
Aliases: | None | ||
Description: | high mobility group nucleosomal binding domain 2 [Source:HGNC Symbol;Acc:4986] |
Percent Identity: | 94.05 % |
Parental protein coverage: | 98.82 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | EGDAKGDKAKVKDEPQRRSARLSAKPAPPKPEPKPKKAPAKKGEKVPKGKKGKADAGKEGNNPAENGDAK |
EGDAK.DKAKVKD.PQRRSARLSAKPAPPKPEPKPKKAPAKKGEKVPKGKKGK.DAG.EGNNPAENGDAK | |
Retrocopy | EGDAK*DKAKVKDKPQRRSARLSAKPAPPKPEPKPKKAPAKKGEKVPKGKKGKVDAGREGNNPAENGDAK |
Parental | TDQAQKAEGAGDAK |
TDQAQKAEG.GDAK | |
Retrocopy | TDQAQKAEGVGDAK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |