RetrogeneDB ID: | retro_ttru_1176 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | scaffold_106444:90517..90858(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTTRG00000002964 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 90.43 % |
Parental protein coverage: | 95. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRH |
MVNPTVFFDIA.DGEPL.RVSFELFADKVPKTAENF.ALSTG.KGFGYKGSCFHR.IPGFMCQGGDFT.H | |
Retrocopy | MVNPTVFFDIAIDGEPLERVSFELFADKVPKTAENFHALSTGKKGFGYKGSCFHRTIPGFMCQGGDFTCH |
Parental | NGTGGKSIYG-EKFDDENFLLKHTGPGILSMANAGPNTNGSQFFI |
NGTGGKSIYG.EKFDDENFLLKH.GPGILSMANAGPNTNGS.F.. | |
Retrocopy | NGTGGKSIYG<EKFDDENFLLKHMGPGILSMANAGPNTNGSVFHL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Choloepus hoffmanni | ENSCHOG00000011597 | 12 retrocopies | |
Monodelphis domestica | ENSMODG00000016089 | 9 retrocopies | |
Tursiops truncatus | ENSTTRG00000002964 | 16 retrocopies | |
Tursiops truncatus | ENSTTRG00000014385 | 1 retrocopy |