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Detailed information on CNT0002933


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q94F47|UBC28_ARATH, E-value = 2e-60

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0021795, E-value = 3e-24 (A. trichopoda)
CNT0011416, E-value = 2e-37 (S. tuberosum)

Expression of CNT0002933

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MTRLCLKLPTCTRLTRLSMKPLLVAGHRMEINHGKGIDDYL*

>peptide 2 (29 aa)
IKKIFSIIHVCIFFSFIFYSLHLTFKCRR*

>peptide 3 (49 aa)
MASKRIVKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGCI*

Sequence

>CNT0002933
ATTAAAAAAATATTTTCAATTATTCATGTATGTATATTTTTTTCTTTCATTTTTTATTCTTTGCACCTAACTTTCAAATGTAGACGTTGATCCTACGCTA
AACGGAACCTTCTAGAACCCAAAGTTTTTCTCTCAGTTCTTCGTCAATCAAGTCAACCCCCCTTTCAATTTCAACCCTATCTCTGCTCTCTTTTTCTTCA
TCATTTGTTTTTGGGTCTCTCTGTTTCCAAGTTTTTGAGTTATGGCATCGAAACGCATCGTGAAGGAGCTCAAGGATTTGCAGAAGGACCCTCCTACATC
CTGCAGCGCAGGTCCCGTGGCGGAGGATATGTTTCACTGGCAGGCAACAATCATGGGACCTCCTGATAGCCCATATACAGGTTGCATTTAGGACTAAGGT
ATTCCACCCAAACATCAATAGTAATGGAAGTATATGCCTTGACATTCTAAAAGAACAATGGAGCCCAGCACTAACCATTTCTAAGGTCCTTTTGTCCATT
TGCTCATTGTTGACGGATCCCAACCCTGATGACCCGCTTGTGCCTGAAATTGCCCACATGTACAAGGCTGACAAGGCTAAGTATGAAGCCACTGCTCGTA
GCTGGACACAGAATGGAAATCAACCATGGTAAGGGAATTGATGATTACTTGTGAATATTTCTTTGCAAGACATCGGTCATGGAAGAAATTGTTGTAAAAT
GTCACAAATTTTCTGCTTGTTGACTTGCTATTCCAAATGATGGTAATGAAATTATAGTTAGGAACAGGTAGTAGCTGCCTATTGTCGTGGAACTTGATCT
TTTTTTGGCTTGGGACAAAAAAAATCTCTAGTGGGATTATAAAATCATTAAATAGCCATAATAATAGTAGACTTTTTTGTGTGT