SEARCH OPTIONS

lncRNA id
CPC status
Max. peptide length
Max. expression
Potential function
Results confidence
Order results by

Current search details:

Found 2569 records in
Amborella trichopoda

CPC status:   #
Max. peptide length:   #
Max. expression:   #
Potential function:   #
Results confidence:   Show all
Order by:   lncRNA ID

Record details CANTATAdb ID Species Location CPC status (score) Swiss-Prot best hit Max. peptide length Max. expression Potential function Confidence
CNT0021722 A. trichopoda AmTr_v1.0_scaffold00202:197127-208658 (+) noncoding (-0.888771)- 90 63.251 Confident lncRNA
CNT0021721 A. trichopoda AmTr_v1.0_scaffold00202:197127-208658 (+) noncoding (-0.272524)3e-16 (sp|Q75JW3|ORAV1_DICDI) 142 52.839 Confident lncRNA
CNT0021720 A. trichopoda AmTr_v1.0_scaffold00202:87799-91479 (-) noncoding (-0.926147)- 90 8.873 Confident lncRNA
CNT0021719 A. trichopoda AmTr_v1.0_scaffold00201:8912-9511 (+) noncoding (-1.18889)- 36 5.108 Confident lncRNA
CNT0021718 A. trichopoda AmTr_v1.0_scaffold00209:148387-148700 (-) noncoding (-0.517681)0.000000001 (sp|P31093|PSAN_HORVU) 101 260.222 splicing regulationConfident lncRNA
CNT0021717 A. trichopoda AmTr_v1.0_scaffold00213:97526-99364 (+) noncoding (-0.912391)- 75 3.504 Confident lncRNA
CNT0021716 A. trichopoda AmTr_v1.0_scaffold00211:133182-135147 (-) noncoding (-1.08854)- 40 9.729 Confident lncRNA
CNT0021715 A. trichopoda AmTr_v1.0_scaffold00210:139500-191010 (-) coding (0.611876)0 (sp|Q84JB8|RUS3_ARATH) 433 36.092 Low-confidence lncRNA
CNT0021714 A. trichopoda AmTr_v1.0_scaffold00210:16305-26696 (+) noncoding (-1.09658)- 35 5.803 Confident lncRNA
CNT0021713 A. trichopoda AmTr_v1.0_scaffold00216:110375-117783 (+) coding (0.562299)2e-71 (sp|Q0WUA3|MENA_ARATH) 216 0.174 Low-confidence lncRNA
CNT0021712 A. trichopoda AmTr_v1.0_scaffold00214:89466-92190 (+) noncoding (-0.432803)- 167 9.93 Confident lncRNA
CNT0021711 A. trichopoda AmTr_v1.0_scaffold00220:183225-185987 (+) noncoding (-0.310883)0.00000007 (sp|D3ZKD3|ALKB5_RAT) 167 16.939 Confident lncRNA
CNT0021710 A. trichopoda AmTr_v1.0_scaffold00218:36958-51714 (-) noncoding (-0.416034)2e-110 (sp|Q9ZPX1|ARF5_ARATH) 186 25.547 Low-confidence lncRNA
CNT0021709 A. trichopoda AmTr_v1.0_scaffold00224:61383-85912 (-) noncoding (-1.17518)0.0000000004 (sp|Q9VWH8|KISH_DROME) 70 19.414 Confident lncRNA
CNT0021708 A. trichopoda AmTr_v1.0_scaffold00221:8413-10280 (-) noncoding (-1.24496)- 73 2.556 Confident lncRNA
CNT0021707 A. trichopoda AmTr_v1.0_scaffold00221:46094-51448 (+) noncoding (-1.31871)- 54 6.267 Confident lncRNA
CNT0021706 A. trichopoda AmTr_v1.0_scaffold00225:5895-6609 (+) noncoding (-0.300157)2e-22 (sp|O50016|AP2S1_MAIZE) 44 3.316 Confident lncRNA
CNT0021705 A. trichopoda AmTr_v1.0_scaffold00225:150446-157092 (+) noncoding (-0.524313)- 126 3.507 Confident lncRNA
CNT0021704 A. trichopoda AmTr_v1.0_scaffold00228:98405-120891 (+) noncoding (-0.520428)1e-127 (sp|Q9ZTN2|ERD2_PETHY) 277 13.928 Low-confidence lncRNA
CNT0021703 A. trichopoda AmTr_v1.0_scaffold00228:98405-120526 (+) noncoding (-0.562811)1e-126 (sp|Q9ZTN2|ERD2_PETHY) 215 11.126 Low-confidence lncRNA
CNT0021702 A. trichopoda AmTr_v1.0_scaffold00226:89148-94666 (-) noncoding (-1.09546)- 73 15.8 Confident lncRNA
CNT0021701 A. trichopoda AmTr_v1.0_scaffold00235:61848-64425 (+) noncoding (-1.03387)- 87 7.003 Confident lncRNA
CNT0021700 A. trichopoda AmTr_v1.0_scaffold00238:13777-19600 (+) noncoding (-0.562353)5e-78 (sp|Q8LE10|HA22I_ARATH) 160 9.764 Low-confidence lncRNA
CNT0021699 A. trichopoda AmTr_v1.0_scaffold00276:50047-53816 (+) noncoding (-0.789907)2e-45 (sp|O23249|CKS1_ARATH) 94 42.403 Confident lncRNA
CNT0021698 A. trichopoda AmTr_v1.0_scaffold00276:22915-41710 (+) noncoding (-1.19122)- 41 2.722 Confident lncRNA
CNT0021697 A. trichopoda AmTr_v1.0_scaffold00278:16034-44140 (+) noncoding (-0.425167)2e-53 (sp|Q9SW33|TL1Y_ARATH) 156 17.626 Low-confidence lncRNA
CNT0021696 A. trichopoda AmTr_v1.0_scaffold00280:28534-34537 (+) noncoding (-0.877747)2e-79 (sp|Q8LE10|HA22I_ARATH) 153 2.407 Confident lncRNA
CNT0021695 A. trichopoda AmTr_v1.0_scaffold00269:24712-39681 (-) coding (0.227793)2e-87 (sp|Q93WI0|STR12_ARATH) 314 26.394 Low-confidence lncRNA
CNT0021694 A. trichopoda AmTr_v1.0_scaffold00269:24712-39681 (-) coding (0.230478)2e-87 (sp|Q93WI0|STR12_ARATH) 314 31.292 Low-confidence lncRNA
CNT0021693 A. trichopoda AmTr_v1.0_scaffold00336:29438-47602 (+) noncoding (-0.852963)- 74 1.714 Confident lncRNA
CNT0021692 A. trichopoda AmTr_v1.0_scaffold00328:1415-4848 (+) noncoding (-0.0997822)- 325 14.083 Confident lncRNA
CNT0021691 A. trichopoda AmTr_v1.0_scaffold00328:1415-4848 (+) noncoding (-0.0846205)- 325 16.442 Confident lncRNA
CNT0021690 A. trichopoda AmTr_v1.0_scaffold00340:29358-30972 (-) noncoding (-0.164257)0.0000001 (sp|Q5BLX8|WDR83_RAT) 86 3.095 Confident lncRNA
CNT0021689 A. trichopoda AmTr_v1.0_scaffold00410:30951-31511 (+) noncoding (-0.926865)- 41 6.915 Confident lncRNA
CNT0021688 A. trichopoda AmTr_v1.0_scaffold00346:6601-9592 (-) noncoding (-0.987584)0.0000002 (sp|Q941D6|HDA14_ARATH) 97 31.629 Confident lncRNA
CNT0021687 A. trichopoda AmTr_v1.0_scaffold00348:792-3922 (-) noncoding (-0.800806)- 78 4.934 Confident lncRNA
CNT0021686 A. trichopoda AmTr_v1.0_scaffold00454:132-3196 (-) noncoding (-1.00436)- 82 2.48 Confident lncRNA
CNT0021685 A. trichopoda AmTr_v1.0_scaffold00470:20997-21794 (+) noncoding (-1.06524)0.00000002 (sp|Q9ZNS6|RCI2B_ARATH) 80 4.233 Confident lncRNA
CNT0021684 A. trichopoda AmTr_v1.0_scaffold00447:2423-16594 (+) noncoding (-1.09754)- 93 3.18 Confident lncRNA
CNT0021683 A. trichopoda AmTr_v1.0_scaffold00606:15896-18228 (-) coding (0.732745)1e-58 (sp|Q70XY3|RK20_AMBTC) 119 477.672 Low-confidence lncRNA
CNT0021682 A. trichopoda AmTr_v1.0_scaffold00450:14199-16309 (+) noncoding (-0.995586)6e-29 (sp|K4BVL1|SPA_SOLLC) 103 3.513 Confident lncRNA
CNT0021681 A. trichopoda AmTr_v1.0_scaffold00450:14199-16309 (+) noncoding (-0.921964)2e-42 (sp|K4BVL1|SPA_SOLLC) 103 4.375 Confident lncRNA
CNT0021680 A. trichopoda AmTr_v1.0_scaffold00764:268-683 (-) noncoding (-0.842205)- 44 0.607 Confident lncRNA
CNT0021679 A. trichopoda AmTr_v1.0_scaffold00589:8159-9106 (-) noncoding (-1.37172)1e-37 (sp|P22195|PER1_ARAHY) 32 0.784 splicing regulationConfident lncRNA
CNT0021678 A. trichopoda AmTr_v1.0_scaffold00610:3527-9986 (+) noncoding (-0.858308)0.0000008 (sp|Q8GZ43|YZR3_ARATH) 159 11.423 Confident lncRNA
CNT0021677 A. trichopoda AmTr_v1.0_scaffold00644:1496-2814 (+) noncoding (-1.22787)- - 2.345 Confident lncRNA
CNT0021676 A. trichopoda AmTr_v1.0_scaffold00662:1-7386 (+) noncoding (-0.746233)- 172 10.038 Confident lncRNA
CNT0021675 A. trichopoda AmTr_v1.0_scaffold00716:187-2708 (-) noncoding (-1.16883)0.000001 (sp|C0LGG6|Y5189_ARATH) 95 3.247 Confident lncRNA
CNT0021674 A. trichopoda AmTr_v1.0_scaffold00738:206-5113 (+) noncoding (-0.26655)0.000000000001 (sp|B6TYV8|CNR2_MAIZE) 42 31.57 Confident lncRNA
CNT0021673 A. trichopoda AmTr_v1.0_scaffold00875:5321-6160 (+) noncoding (-0.927378)- 73 3.811 Confident lncRNA