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ENST00000418393 (lncRNA) and ENST00000209718: detailed information for the interacting components



Function(s) assigned to this lncRNA-RNA interaction (ENST00000418393 vs ENST00000209718)

Number of records: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000209718 keratin 23 (histone deacetylase inducible) protein coding ENST00000418393 530 169 CDS Cis

Expression


NOTE: Expression values are provided at the transcript level. Differential expressio analysis was performed at the gene level.


Expression for ENST00000418393 (lncRNA)Expression for ENST00000209718



Is lncRNA (ENST00000418393) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000234477 - >0.05 - - -


Is the interacting transcript (ENST00000209718) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000108244 down 0.000000671057096742 2.79752 YES YES

NOTE: the differential expression results were calculated for KTCN vs non-KTCN samples.
The KTCN samples: KC_15, KC_16, KC_17, KC_18, KC_19, KC_20, KC_21, KC_22, KC_23, KC_25, KC_26, KC_28, KC_30, KC_31, KC_32, KC_34, KC_55
The non-KTCN samples: KR_08, KR_13, KR_14, KR_15, KR_18, KR_19, KR_21, KR_23, KR_24, KR_25, KR_26, KR_27, KR_28, KR_33, KR_35, KR_48, KR_52


Other interactions


All interactions for ENST00000418393 (lncRNA)All interactions for ENST00000209718