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ENST00000551844 (lncRNA) and ENST00000228741: detailed information for the interacting components



Function(s) assigned to this lncRNA-RNA interaction (ENST00000551844 vs ENST00000228741)

Number of records: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000228741 ELK3, ETS-domain protein (SRF accessory protein 2) protein coding ENST00000551844 1275 432 CDS_UTR Cis

Expression


NOTE: Expression values are provided at the transcript level. Differential expressio analysis was performed at the gene level.


Expression for ENST00000551844 (lncRNA)Expression for ENST00000228741



Is lncRNA (ENST00000551844) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000258177 - >0.05 - - -


Is the interacting transcript (ENST00000228741) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000111145 down 2.80972819113e-23 2.87046 YES YES

NOTE: the differential expression results were calculated for KTCN vs non-KTCN samples.
The KTCN samples: KC_15, KC_16, KC_17, KC_18, KC_19, KC_20, KC_21, KC_22, KC_23, KC_25, KC_26, KC_28, KC_30, KC_31, KC_32, KC_34, KC_55
The non-KTCN samples: KR_08, KR_13, KR_14, KR_15, KR_18, KR_19, KR_21, KR_23, KR_24, KR_25, KR_26, KR_27, KR_28, KR_33, KR_35, KR_48, KR_52


Other interactions


All interactions for ENST00000551844 (lncRNA)All interactions for ENST00000228741