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ENST00000421004 (lncRNA) and ENST00000361228: detailed information for the interacting components



Function(s) assigned to this lncRNA-RNA interaction (ENST00000421004 vs ENST00000361228)

Number of records: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000361228 Ras association (RalGDS/AF-6) domain family (N-terminal) member 9 protein coding ENST00000421004 574 299 UTR3 Trans

Expression


NOTE: Expression values are provided at the transcript level. Differential expressio analysis was performed at the gene level.


Expression for ENST00000421004 (lncRNA)Expression for ENST00000361228



Is lncRNA (ENST00000421004) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000245556 up 0.000383705754801 1.55571 YES YES


Is the interacting transcript (ENST00000361228) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000198774 down 0.000137183360284 1.68687 . YES

NOTE: the differential expression results were calculated for KTCN vs non-KTCN samples.
The KTCN samples: KC_15, KC_16, KC_17, KC_18, KC_19, KC_20, KC_21, KC_22, KC_23, KC_25, KC_26, KC_28, KC_30, KC_31, KC_32, KC_34, KC_55
The non-KTCN samples: KR_08, KR_13, KR_14, KR_15, KR_18, KR_19, KR_21, KR_23, KR_24, KR_25, KR_26, KR_27, KR_28, KR_33, KR_35, KR_48, KR_52


Other interactions


All interactions for ENST00000421004 (lncRNA)All interactions for ENST00000361228