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ENST00000487980 (lncRNA) and ENST00000377411: detailed information for the interacting components



Function(s) assigned to this lncRNA-RNA interaction (ENST00000487980 vs ENST00000377411)

Number of records: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000377411 G protein-coupled receptor 157 protein coding ENST00000487980 626 287 UTR3 Trans

Expression


NOTE: Expression values are provided at the transcript level. Differential expressio analysis was performed at the gene level.


Expression for ENST00000487980 (lncRNA)Expression for ENST00000377411



Is lncRNA (ENST00000487980) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000115762 up 0.000000153383712184 1.46326 YES YES


Is the interacting transcript (ENST00000377411) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000180758 up 0.0000000000169253283519 1.77496 YES YES

NOTE: the differential expression results were calculated for KTCN vs non-KTCN samples.
The KTCN samples: KC_15, KC_16, KC_17, KC_18, KC_19, KC_20, KC_21, KC_22, KC_23, KC_25, KC_26, KC_28, KC_30, KC_31, KC_32, KC_34, KC_55
The non-KTCN samples: KR_08, KR_13, KR_14, KR_15, KR_18, KR_19, KR_21, KR_23, KR_24, KR_25, KR_26, KR_27, KR_28, KR_33, KR_35, KR_48, KR_52


Other interactions


All interactions for ENST00000487980 (lncRNA)All interactions for ENST00000377411