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ENST00000604716 (lncRNA) and ENST00000482603: detailed information for the interacting components



Function(s) assigned to this lncRNA-RNA interaction (ENST00000604716 vs ENST00000482603)

Number of records: 2

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000482603 glyoxylate reductase/hydroxypyruvate reductase processed transcript ENST00000604716 595 294 noncoding Trans
ENST00000482603 glyoxylate reductase/hydroxypyruvate reductase processed transcript ENST00000604716 622 274 noncoding Trans

Expression


NOTE: Expression values are provided at the transcript level. Differential expressio analysis was performed at the gene level.


Expression for ENST00000604716 (lncRNA)Expression for ENST00000482603



Is lncRNA (ENST00000604716) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000270605 up 0.00054203496918 1.56368 . YES


Is the interacting transcript (ENST00000482603) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000137106 up 0.00000110886150063 1.4119 YES YES

NOTE: the differential expression results were calculated for KTCN vs non-KTCN samples.
The KTCN samples: KC_15, KC_16, KC_17, KC_18, KC_19, KC_20, KC_21, KC_22, KC_23, KC_25, KC_26, KC_28, KC_30, KC_31, KC_32, KC_34, KC_55
The non-KTCN samples: KR_08, KR_13, KR_14, KR_15, KR_18, KR_19, KR_21, KR_23, KR_24, KR_25, KR_26, KR_27, KR_28, KR_33, KR_35, KR_48, KR_52


Other interactions


All interactions for ENST00000604716 (lncRNA)All interactions for ENST00000482603