« Back to search



ENST00000509612 (lncRNA) and ENST00000510844: detailed information for the interacting components



Function(s) assigned to this lncRNA-RNA interaction (ENST00000509612 vs ENST00000510844)

Number of records: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000510844 transcribed_unprocessed_pseudogene processed transcript ENST00000509612 866 328 noncoding Cis

Expression


NOTE: Expression values are provided at the transcript level. Differential expressio analysis was performed at the gene level.


Expression for ENST00000509612 (lncRNA)Expression for ENST00000510844



Is lncRNA (ENST00000509612) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000138735 down 0.000101763973588 1.8195 YES YES


Is the interacting transcript (ENST00000510844) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000245958 up 0.000291987607539 1.51212 . YES

NOTE: the differential expression results were calculated for KTCN vs non-KTCN samples.
The KTCN samples: KC_15, KC_16, KC_17, KC_18, KC_19, KC_20, KC_21, KC_22, KC_23, KC_25, KC_26, KC_28, KC_30, KC_31, KC_32, KC_34, KC_55
The non-KTCN samples: KR_08, KR_13, KR_14, KR_15, KR_18, KR_19, KR_21, KR_23, KR_24, KR_25, KR_26, KR_27, KR_28, KR_33, KR_35, KR_48, KR_52


Other interactions


All interactions for ENST00000509612 (lncRNA)All interactions for ENST00000510844