Parental gene:

EIF4B, ENSAMEG00000012023

Aliases:None
Description:eukaryotic translation initiation factor 4B [Source:HGNC Symbol;Acc:3285]
Organism:Panda (Ailuropoda melanoleuca)
Coordinates:GL193014.1:535513..556010(+)


>ENSAMEG00000012023
CTTTTTAAAACAGCAAAAAAGAAGAATAAGAAGGGGAAAACTATCTCCCTAACAGACTTTCTGGCTGAAGATGGAGGGAC
TGGGGGAGGAAGCACCTATGTCCCCAAACCAGTCAGCTGGGCTGATGAAACAGATGACCTGGAAGGAGATGTTTCAACCA
CTTGGCACAGTAATGATGACGACGTGTATAGGGCACCTCCAATTGACCGTTCCATCCTGCCCACTGCTCCACGGGCTGCT
CGGGAACCCAATATCGACCGGAGCCGTCTTCCGAAATCGCCACCCTATACTGCTTTTCTAGGGAACCTGCCCTATGATGT
GACAGAAGAATCCATTAAGGAATTCTTTAGAGGATTAAATATCAGTGCAGTGCGTTTACCACGTGAACCCAGCAATCCAG
AGAGGTTGAAAGGTTTTGGTTACGCTGAGTTTGAGGACCTGGATTCTTTGCTCAGTGCCCTGAGCCTCAACGAAGAGTCT
CTAGGTAACAGGAGAATTCGAGTGGACGTTGCTGATCAAGCACAGGATAAAGACAGGGATGATCGTTCTTTTGGCCGAGA
TAGAAACCGGGATTCTGACAAAACAGATACAGACTGGAGGGCACGTCCTGCCACAGACAGTTTTGATGACTACCCGCCGA
GGAGAGGCGATGACAGCTTTGGAGACAAGTATCGAGATCGTTACGATTCAGACCGATACCGTGATGGGTATCGGGACGGG
TATCGTGATGGCCCACGCCGAGACATGGATCGATATGGGGGCCGGGATCGCTATGATGACCGAGGCAGCAGAGACTATGA
CAGAGGCTACGATTCCAGGCTAGGCAGTGGCAGAAGAGCATTTGGTAGTGGGTACCGTAGGGATGACGACTACAGAGGAG
GCGGGGACCGCTACGAAGACAGATACGACAGACGAGACGACCGGTCATGGAGCTCCAGGGATGATTACTCTCGGGATGAC
TACAGGCGTGATGACAGAGGTCCCCCCCAAAGACCCAAACTGAATCTAAAGCCTCGGAGCACTCCCAAGGACGATGACGC
CTCTGCCAGCACCTCGCAGTCCAGCCGCGCGGCCTCCATCTTCGGAGGGGCCAAGCCTGTGGACACGGCGGCCAGAGAGC
GAGAAGTTGAAGAACGGCTGCAGAAGGAGCAGGAGAAGCTGCAGCGCCAGCTGGACGAGCCGAAGCTGGAGCGGCGGCCC
CGGGAGAGACACCCAAGCTGGCGAAGTGAAGAGACTCAGGAACGGGAACGGTCCAGGACAGGAAGTGAGTCATCACAGAC
TGGGACCTCGGCCACATCTGGCAGAAATGCACGAAGGAGAGAGAGTGAGAAGTCTCTCGAAAATGAAGCACCCAGTAAGG
AGGAAGACTGTCACTCTCCAACTTCTAAGCCTCCCAAATCCGAACAGCCGCTGAAGGTAATGCCGGCCCCTCCGCCAAAG
GAGAATGCTTGGGTGAAGCGAAGTTCTAACCCTCCTGCTCGATCTCAGAGCTCAGACACAGAGCAGCAGTCCCCTACAAG
TGGTGGGGGGAAAGTACTTCCAGCTCAGCCACCCGAGGAAGGACCAGCAAGGAGAGCAGATGAAAACAAAGTAGATGGGG
TGAGTGTCCCAAAAGGCCAAAGTGGGAACTCCAGCCGTGGTCCAGGAGACGGAGGGAGCAAAGACCACTGGAAGGAGTCA
GATAGGAGAGATGGCAAAAAGGATCAAGACTCCCGATCTGCACCTGAGCCAAAGAAACCTGAAGAAAATCCAGCTTCCAA
GTTCAGTTCTGCAAGCAAGTATGCTGCTCTCTCTGTTGATGGCGAAGATGAGAACGAGGGAGATTACACCGAATAG

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000007117 ortholog_one2one 2 retrogenes
retro_cfam_1447, retro_cfam_936,
Choloepus hoffmanni ENSCHOG00000001608 ortholog_one2one 2 retrogenes
retro_chof_1310, retro_chof_366,
Cavia porcellus ENSCPOG00000005595 possible_ortholog 3 retrogenes
retro_cpor_278, retro_cpor_752, retro_cpor_937,
Gorilla gorilla ENSGGOG00000013695 possible_ortholog 5 retrogenes
retro_ggor_1233, retro_ggor_1263, retro_ggor_1882, retro_ggor_1883, retro_ggor_3024,
Loxodonta africana ENSLAFG00000009534 ortholog_one2one 1 retrogene
retro_lafr_294,
Macropus eugenii ENSMEUG00000012341 ortholog_one2one 2 retrogenes
retro_meug_1054, retro_meug_585,
Macaca mulatta ENSMMUG00000001062 possible_ortholog 5 retrogenes
retro_mmul_1428, retro_mmul_2384, retro_mmul_2589, retro_mmul_731, retro_mmul_783,
Mus musculus ENSMUSG00000058655 ortholog_one2one 1 retrogene
retro_mmus_3686,
Rattus norvegicus ENSRNOG00000010103 ortholog_one2many 2 retrogenes
retro_rnor_2467, retro_rnor_2972,
Tarsius syrichta ENSTSYG00000012880 ortholog_one2one 1 retrogene
retro_tsyr_452,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_amel_559 57.37 50.90
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2. retro_amel_1107 63.48 56.96
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Download FASTA sequences of all ENSAMEG00000012023 retrocopies