Parental gene:

MMU.9577, ENSMMUG00000001062

Aliases:None
Description:eukaryotic translation initiation factor 4B [Source:RefSeq peptide;Acc:NP_001182737]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:11:50077601..50100758(+)


>ENSMMUG00000001062
TTTAAAACAGCAAAAAAGAAGAATAAGAAGGGGAAGACTATCTCCCTAACAGACTTTCTGGCTGAGGATGGGGGTACTGG
TGGAGGAAGCACCTATGTTTCCAAACCAGTCAGCTGGGCTGATGAAACGGATGACCTGGAAGGAGATGTTTCAACAACGT
GGCACAGTAATGACGACGATGTGTACAGGGCGCCTCCAATTGACCGTTCCATCCTTCCCACTGCTCCACGGGCTGCTCGG
GAACCCAATATCGACCGGAGCCGTCTTCCCAAATCGCCACCCTACACTGCTTTTCTAGGGAACCTACCCTATGATGTGAC
AGAAGAATCAATTAAGGAATTCTTTAGAGGATTAAATATCAGTGCAGTGCGTTTACCACGTGAACCCAGCAATCCAGAGA
GGTTGAAAGGTTTTGGTTATGCTGAATTTGAGGACCTGGATTCCCTGCTCAGTGCCCTGAGTCTCAATGAAGAGTCTCTA
GGTAACAGGAGAATTCGAGTGGACGTTGCTGATCAAGCACAGGATAAAGACAGGGATGATCGTTCTTTTGGCCGTGATAG
AAATCGGGATTCTGACAAAACAGATACAGACTGGAGGGCTCGTCCTGCTACAGACAGCTTTGATGACTACCCACCTAGAA
GAGGTGATGATAGCTTTGGAGACAAGTATCGAGATCGTTATGATTCAGACCGGTATCGGGATGGGTATCGGGATGGCCCA
CGCCGGGATATGGATCGATATGGTGGCCGGGATCGCTATGATGACCGAGGCAGCAGAGACTATGATAGAGGCTATGAATC
CCGGATAGGCAGTGGCAGAAGAGCATTTGGCAGTGGGTATCGCAGGGATGATGACTACAGAGGAGGCGGGGACCGCTATG
AAGACCGATACGACAGACGGGATGATCGGTCGTGGAGCTCCAGAGATGATTACTCTCGGGATGATTATAGGCGCGATGAC
AGAGGTCCCCCTCAAAGACCCAAACTGAATCTAAAGCCTCGGAGTACTCCTAAGGAAGATGATTCCTCTGCTAGTACCTC
CCAGTCCAGTCGAGCTGCTTCTATCTTTGGAGGGGCAAAGCCTGTTGACACAGCTGCTAGAGAAAGAGAAGTAGAAGAAC
GGCTACAGAAGGAACAAGAGAAGTTGCAGCGTCAGCTGGATGAGCCAAAACTAGAACGACGGCCTCGGGAGAGACACCCA
AGCTGGCGAAGTGAAGAAACTCAGGAACGGGAACGGTCGAGGACAGGAAGTGAGTCATCACAGACTGGGACCTCCGCCAC
ATCTGGCAGAAATGCACGAAGGAGAGAGAGTGAGAAGTCTCTAGAAAATGAAACACTCAATAAGGAGGAAGATTGTCACT
CTCCAACTTCTAAACCTCCCAAACCTGATCAGCCCCTAAAGGTAATGCCAGCCCCTCCACCAAAGGAGAATGCTTGGGTG
AAGCGAAGTTCTAACCCTCCAGCTCGATCTCAGAGCTCAGACACAGAGCAGCAATCCCCTACAAGTGGTGGGGGAAAAGT
AGCTCCAGCTCAACCATCTGAGGAAGGACCAGCAAGGAAAGATGAAAATAAAGTAGATGGGATGAATGTCCCAAAAGGCC
AAACTGGGACCTCTAGCCGTGGACCAGGAGACGGAGGGAACAAAGACCACTGGAAGGAGTCAGATAGGAAAGATGGCAAA
AAGGATCAAGACTCCAGATCTGCACCTGAGCCAAAGAAACCTGAGGAAAATCCAGCTTCGAAGTTCAGTTCTGCAAGCAA
GTATGCTGCTCTCTCTGTTGATGGTGAAGATGAAAACGAGGGAGAAGATTATGCCGAATAG

Library Parental gene expression (RPM)
SRP007412_brain 42 .80 RPM
SRP007412_brain_prefrontal_cortex 92 .18 RPM
SRP007412_cerebellum 45 .72 RPM
SRP007412_heart 75 .55 RPM
SRP007412_kidney 50 .47 RPM
SRP007412_liver 43 .46 RPM
SRP007412_testis 80 .06 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000012023 possible_ortholog 2 retrogenes
retro_amel_1107, retro_amel_559,
Canis familiaris ENSCAFG00000007117 possible_ortholog 2 retrogenes
retro_cfam_1447, retro_cfam_936,
Choloepus hoffmanni ENSCHOG00000001608 possible_ortholog 2 retrogenes
retro_chof_1310, retro_chof_366,
Callithrix jacchus ENSCJAG00000018176 ortholog_one2many 2 retrogenes
retro_cjac_1717, retro_cjac_2001,
Cavia porcellus ENSCPOG00000005595 ortholog_many2many 3 retrogenes
retro_cpor_278, retro_cpor_752, retro_cpor_937,
Homo sapiens ENSG00000063046 possible_ortholog 7 retrogenes
retro_hsap_1686, retro_hsap_2639, retro_hsap_2698, retro_hsap_3767, retro_hsap_4196, retro_hsap_4848, retro_hsap_4891,
Gorilla gorilla ENSGGOG00000013695 possible_ortholog 5 retrogenes
retro_ggor_1233, retro_ggor_1263, retro_ggor_1882, retro_ggor_1883, retro_ggor_3024,
Loxodonta africana ENSLAFG00000009534 possible_ortholog 1 retrogene
retro_lafr_294,
Macropus eugenii ENSMEUG00000012341 ortholog_one2many 2 retrogenes
retro_meug_1054, retro_meug_585,
Macaca mulatta ENSMMUG00000006205 within_species_paralog 2 retrogenes
retro_mmul_2634, retro_mmul_619,
Mus musculus ENSMUSG00000058655 ortholog_one2many 1 retrogene
retro_mmus_3686,
Nomascus leucogenys ENSNLEG00000017727 possible_ortholog 3 retrogenes
retro_nleu_2371, retro_nleu_2601, retro_nleu_721,
Pongo abelii ENSPPYG00000025848 possible_ortholog 7 retrogenes
retro_pabe_1388, retro_pabe_1560, retro_pabe_2283, retro_pabe_260, retro_pabe_3532, retro_pabe_3768, retro_pabe_506,
Rattus norvegicus ENSRNOG00000010103 possible_ortholog 2 retrogenes
retro_rnor_2467, retro_rnor_2972,
Ictidomys tridecemlineatus ENSSTOG00000006800 ortholog_one2many 1 retrogene
retro_itri_604,
Tupaia belangeri ENSTBEG00000005423 ortholog_one2many 2 retrogenes
retro_tbel_2363, retro_tbel_4167,
Tarsius syrichta ENSTSYG00000012880 possible_ortholog 1 retrogene
retro_tsyr_452,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_731 94.03 98.51
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_mmul_783 95.06 66.83
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_mmul_1428 80.60 59.74
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_mmul_2384 83.33 68.98
Please wait, loading
Please wait, loading
Please wait, loading
5. retro_mmul_2589 84.26 99.67
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSMMUG00000001062 retrocopies