Parental gene:

PLEKHB2, ENSBTAG00000000941

Aliases:None
Description:pleckstrin homology domain-containing family B member 2 [Source:RefSeq peptide;Acc:NP_001076998]
Organism:Cow (Bos taurus)
Coordinates:2:1850106..1899289(+)


>ENSBTAG00000000941
ATGGCATTTGTGAAGAGTGGATGGTTGCTGCGACAGAGTACTATTTTGAAGCGCTGGAAGAAGAATTGGTTTGACCTGTG
GTCAGATGGTCACCTGATCTATTATGATGCCCAGACTCGGCAGAGCGTAGAAGATAAGGTCCACATGCCAGTGGACTGCA
TCAACATCCGCATGGGGCGTGAGTGTCGGGATATTCAACCACCAGATGGGAAGCCAAAAGACTGTATGCTGCAGATTGTT
TGCCGAGATGGAAAAACCATCAGTCTTTGTGCAGAAAGCACAGATGATTGTTTGGCCTGGAAGTTTACACTCCAGGATTC
CAGGACAAACACAGCTTATGTTGGCTCAGAAGTCATGTATGATGAGACAGCTGTGGCTTCCTCCCCACCTCCTTACACAG
CGTATGCTGCACCGACCCCTGAGCAGGCGTATGGCTATGGTCCATACAGTGGTGCATACCCACCAGGAACTCAAGTTGTC
TATGCTGCAAATGGACAGGCTTATGCTGTACCCTATCAGTACCCGTATGCAGGGCTTTATGGACAGCAGCCTGCCAACCA
AGTCATCATTCGTGAGCGGTACCGAGACAACGACAGCGACCTGGCGCTGGGCATGCTGGCCGGAGCAGCCACAGGCATGG
CCCTGGGGTCTCTGTTCTGGGTCTTCTAG

Library Parental gene expression (RPM)
ERP005899_liver 18 .53 RPM
ERP005899_muscle 109 .91 RPM
SRP017611_brain 198 .57 RPM
SRP017611_kidney 152 .21 RPM
SRP017611_liver 9 .51 RPM
SRP030211_testis 90 .33 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000026329 ortholog_one2one 1 retrogene
retro_cpor_985,
Equus caballus ENSECAG00000017331 ortholog_one2one 1 retrogene
retro_ecab_1069,
Felis catus ENSFCAG00000027063 ortholog_one2one 1 retrogene
retro_fcat_213,
Homo sapiens ENSG00000115762 ortholog_one2one 1 retrogene
retro_hsap_1890,
Meleagris gallopavo ENSMGAG00000001052 ortholog_one2one 1 retrogene
retro_mgal_17,
Monodelphis domestica ENSMODG00000018634 ortholog_one2one 1 retrogene
retro_mdom_720,
Nomascus leucogenys ENSNLEG00000010698 ortholog_one2one 2 retrogenes
retro_nleu_1471, retro_nleu_2016,
Oryctolagus cuniculus ENSOCUG00000024282 ortholog_one2one 1 retrogene
retro_ocun_654,
Otolemur garnettii ENSOGAG00000028408 ortholog_one2many 2 retrogenes
retro_ogar_2771, retro_ogar_703,
Pongo abelii ENSPPYG00000012740 ortholog_one2one 1 retrogene
retro_pabe_1570,
Ictidomys tridecemlineatus ENSSTOG00000020509 ortholog_one2many 1 retrogene
retro_itri_56,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1134 73.09 99.55
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2. retro_btau_1635 95.50 100.00
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Download FASTA sequences of all ENSBTAG00000000941 retrocopies