Parental gene:

PLEKHB2, ENSECAG00000017331

Aliases:None
Description:pleckstrin homology domain containing, family B (evectins) member 2 [Source:HGNC Symbol;Acc:19236]
Organism:Horse (Equus caballus)
Coordinates:18:853804..870566(+)


>ENSECAG00000017331
ATGGCGTTTGTGAAGAGTGGGTGGTTGCTGCGACAGAGTACTATTTTGAAGCGCTGGAAGAAGAATTGGTTTGACCTGTG
GTCGGATGGTCACCTGATCTATTATGATGACCAAACTCGGCAGAGTGTCGAGGATAAGGTCCACATGCCAGTGGACTGCA
TCAATATCCGCATGGGACATGAATGTCGGGATGTGCAGCCTCCAGATGGGAAGCCGAAAGACTGTATGCTGCAGATTGTT
TGCCGAGATGGGAAAACGATCAGTCTTTGTGCAGAAAGCACAGATGATTGTTTGGCCTGGAAATTTACGCTTCAGGATTC
CAGGACAAATACAGCTTATGTGGGCTCAGAAGTCATGTATGATGAGACTGCTGTGGCTGCTTCTCCACCTCCCTACACAG
CCTATGCCACACCAACCCCTGAGCAGGCATATGGCTATGGTCCATATAGCGGTGTGTACCCGCCCGGAACTCAGGTGGTC
TACACTGCGAATGGGCAGGCTTATGCTGTACCCTACCAGTACCCATGTGCAGGACTTTATGGACAACAGCCTGCCAACCA
AGTCATCATTCGTGAGCGGTATCGAGACAATGACACTGATCTGGCGCTGGGCATGCTGGCTGGAGCAGCTACGGGCATGG
CCTTAGGGTCTCTGTTCTGGGTCTTCTAG

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 30 .25 RPM
SRP021940_embryo 17 .06 RPM
SRP021940_cerebellum 103 .19 RPM
SRP021940_testis 56 .91 RPM
SRP021940_placental_villous 28 .91 RPM
SRP021940_articular_cartilage 16 .53 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000000941 ortholog_one2one 2 retrogenes
retro_btau_1134, retro_btau_1635,
Cavia porcellus ENSCPOG00000026329 ortholog_one2one 1 retrogene
retro_cpor_985,
Felis catus ENSFCAG00000027063 ortholog_one2one 1 retrogene
retro_fcat_213,
Homo sapiens ENSG00000115762 ortholog_one2one 1 retrogene
retro_hsap_1890,
Meleagris gallopavo ENSMGAG00000001052 ortholog_one2one 1 retrogene
retro_mgal_17,
Monodelphis domestica ENSMODG00000018634 ortholog_one2one 1 retrogene
retro_mdom_720,
Nomascus leucogenys ENSNLEG00000010698 ortholog_one2one 2 retrogenes
retro_nleu_1471, retro_nleu_2016,
Oryctolagus cuniculus ENSOCUG00000024282 ortholog_one2one 1 retrogene
retro_ocun_654,
Otolemur garnettii ENSOGAG00000028408 ortholog_one2many 2 retrogenes
retro_ogar_2771, retro_ogar_703,
Pongo abelii ENSPPYG00000012740 ortholog_one2one 1 retrogene
retro_pabe_1570,
Ictidomys tridecemlineatus ENSSTOG00000020509 ortholog_one2many 1 retrogene
retro_itri_56,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_1069 82.65 98.65
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Download FASTA sequences of all ENSECAG00000017331 retrocopies